| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_3727 |
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| Symbol | |
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| ID | 4482457 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 4679236 |
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| End bp | 4682085 |
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| Gene Length | 2850 bp |
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| Protein Length | 949 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639724483 |
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| Product | translation initiation factor 2 |
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| Protein accession | YP_867618 |
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| Protein GI | 117927001 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0532] Translation initiation factor 2 (IF-2; GTPase) |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00487] translation initiation factor IF-2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGCGACA ATAAACCCAG CGAAGGCGAC AATAAACTGC AGCTGAAAGC GCCACGCCGT
ATCGTGCTCA AGAAGACGGT GGAAGGCAGC TCGATCAAGC AGAACTTCGC CCATGGCCGT
AGCAAGAGCG TTGCGGTTGA AGTACGCCGG AAGAAAACCT TCTTAAAGCC TGGTAGCAAG
GAGGGTGGTT TCCTGATTGA TCAGGAGAAG CCCGAAGAGA TCGAAGAGAA GAAGGAGGCT
CCAAAGTCGC CTAAGCGCGG TGAGGAGCGC CATATTCTGC GTCCCTTAAC ACCTGAAGAG
ATTGAGGCCA AGCAGAAAGA GCTGGAGGCC AAACGTCAGG CTGAAGAAGA GGCGGCCCGT
CAGAAGGCCG AGCAAGAGGC CGCTCGCCAA AAGCAAGAGG CCGAAGCCGC CCGTCGAAAA
GCCGAGCAAG AGGCCGCTCG CCAAAAGCAA GAGGCCGAAG CCGCCCGTCG AAAAGCCGAA
GAAGAGGCCG CTCGTGCTGC GGCTGCTGCG CCTGCCGCTC CTGTGGCAGC GCCGGCAGAG
GCTGCTCCAG CGGTACCTGT TGCGGTTGCA GAGCCCGTCG TTGTTGCGCA GCCTGCCCCA
GAGGCGCCTG CCCCAGTTGT GGAAGAAGAG ATGGTGGAAG CCAAGCCCCT CCCAGCCGCA
GCGCCAGCGG CACCCAGTGC ACCGGTTAGG CTTTTGCACC AGCCTGTTGA GGAGGAGCCC
AAGCGCAAGC TCTCCAAGGC CCAGCGTGAG GAGATGGCGC GCCGCAAGAC CGAAGATTTG
GTCAGCAAGC GTCTGAACCA GTTGGAAGAG CTGCGGGAGC AGAAACGTAA AGAGGATGCC
CGTAAAGAGG CCGAGGTTGC GCTGGCTAAA AAAGAGAAGC CCGTTGTGGC GGCCACAGCG
GCGGCCGCAG CAGAGGTGGT TGCCGGTCGT ACCCCGCGTG AAGATTCGGC CGGAGAGCCC
TTTTCGGCTG GCCGTCGCAA GAATAAAAAA TATCAGGACA ATGAGGATCG TTTGCAGCAG
CCACGGGGCA AAAGCCGTCG CCGCAAGCCC TTTAAGTCCG AGATGCAAGC CCCCGCGCCT
GTATATCGTG AGGTCACCAT TCCGGAGACC ATTACGGTGG GCGAATTGGC CAATCGTATG
GCGGTCAAAT CTTCCGAGGT GATCAAACTG CTGTTTGCAC AGGGTATGTT GGTGACCATT
AACCAGACCC TGGATCAAGA CACGGCGGTT TTGGTGGTGG AAGAGATGGG TCACAAGCCC
AAGTCGGTAT CGGAATCTGC GGCCATTGAG GCGGAGTTGG ATGCCGGTGA GGATGCCGCA
GAGGATATGG AGACACGTCC GCCTGTGATT ACCGTGATGG GTCACGTGGA TCATGGTAAA
ACATCGCTGC TGGACGCTAT TCGTTCCACC GATGTTACCT CTCGCGAGCA TGGTGGGATT
ACCCAGCATA TTGGTGCTTA TCAGGTGACG TTGGCCAGTG GTGATAAAAT CACCTTCCTG
GATACCCCTG GACACTCGGC CTTTACGGCC ATGCGTGCCC GTGGTGCGCA GGTGACGGAC
ATTGTGGTAC TGGTGGTGGC GGCGGATGAT GGGGTCATGC CCCAGACGGT TGAGGCGATC
AACCACGCCA AATCGGCCAA GGTGCCCATT GTGGTGGCGG TGAACAAGAT TGATAAACCC
GGTTCCAATC CAGATCGGGT GATGCAGCAG CTTTCTGACC ATGGTTTGGT GCCAGAGGCC
TGGGGTGGTG ATACCATCTT TGTGCATGTG TCGGCCAAGA GTGGCGAGGG TATCAGCACC
CTAGAAGAGA TGTTACTGTT GCAGGCAGAG ATGCTTAATT TGCAGAGCAA CCCCACCAAA
AAGCGGGCGC GTGGTACCAT TATTGAGGCC AATTTGGATC GTGGTCGGGG TGCGGTGGCG
ACCTGTTTGG TGCAGAACGG TACCCTGCGG GTGGGTGACA TCTGCGTGGT TGGTAATGAG
TGGTGCCGTG TACGGGCTCT GAACGATGAC CGGGGCAATC AGGTAAGCGA GGCATCACCC
TCGATGCCGG TTGAGATCAT TGGTCTGTCG GGTGTGCCCC AAGCGGGTGA TGATCTGGTG
GCGGTCAATG ATGAGCGCCG GGCTCGTGAG ATTGCCCAGT TCCGTCAGCA GAAAGATAAA
GAGGCCATTC AGGCCAAGCA ACAGCCTGCG ACCCGTCTGG AAGATATGTT TGAGCATATC
GAACAGGGCG AGGTAGAAGA GCTGAATGTG GTATTGAAGG CGGATGTGCA GGGTTCTGTG
GAAGCGGTGG CCGAAGCGCT ACGCAAGATC AAGCATGAGC AGATTGAGGT GCGGGTGATT
CACACCGGTG TGGGTGGTAT TAACGAATCG GACGTGATGC TGGCGGTAGC CTCTGGGGCG
ATTACGGTGG GCTTTAATGT GCGGGCCGAT GCCAAGGCAC GGGATTTGGC CAAACGTGAG
CAGATTGATC TACGTTTCTA CAACGTGATT TATGATCTGG TGGACGATAT CAGTCTGGCA
TTGGAGGGCC GTTTGGCACC TACCGTGCGG GAGAAGGTAT TGGGTCATGC CCAGGTGCGC
GAGGTCTTCC GGATTACCAA GATTGGTAAC GTATGTGGCT GTTTGGTCAC CGATGGTATT
ATTCAGCGTA ATGGCAAGTT GCGTATTTTG CGCCAGAACG TTGTGGTTTA TGAGGGACCG
GTCTCCGCCC TGAAGCGCTT TAAGGATGAT GTTAAAGAGG TGCGTGAAGG GTTTGAGTGC
GGCATCAGCA TCGAGAAGTT TAACGATGTT AAGGTGGATG ACGTGCTGGA GTGCTATGTG
GAAGAGCAGG TTAAGCAGAC CCTCTCTTAA
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| Protein sequence | MSDNKPSEGD NKLQLKAPRR IVLKKTVEGS SIKQNFAHGR SKSVAVEVRR KKTFLKPGSK
EGGFLIDQEK PEEIEEKKEA PKSPKRGEER HILRPLTPEE IEAKQKELEA KRQAEEEAAR
QKAEQEAARQ KQEAEAARRK AEQEAARQKQ EAEAARRKAE EEAARAAAAA PAAPVAAPAE
AAPAVPVAVA EPVVVAQPAP EAPAPVVEEE MVEAKPLPAA APAAPSAPVR LLHQPVEEEP
KRKLSKAQRE EMARRKTEDL VSKRLNQLEE LREQKRKEDA RKEAEVALAK KEKPVVAATA
AAAAEVVAGR TPREDSAGEP FSAGRRKNKK YQDNEDRLQQ PRGKSRRRKP FKSEMQAPAP
VYREVTIPET ITVGELANRM AVKSSEVIKL LFAQGMLVTI NQTLDQDTAV LVVEEMGHKP
KSVSESAAIE AELDAGEDAA EDMETRPPVI TVMGHVDHGK TSLLDAIRST DVTSREHGGI
TQHIGAYQVT LASGDKITFL DTPGHSAFTA MRARGAQVTD IVVLVVAADD GVMPQTVEAI
NHAKSAKVPI VVAVNKIDKP GSNPDRVMQQ LSDHGLVPEA WGGDTIFVHV SAKSGEGIST
LEEMLLLQAE MLNLQSNPTK KRARGTIIEA NLDRGRGAVA TCLVQNGTLR VGDICVVGNE
WCRVRALNDD RGNQVSEASP SMPVEIIGLS GVPQAGDDLV AVNDERRARE IAQFRQQKDK
EAIQAKQQPA TRLEDMFEHI EQGEVEELNV VLKADVQGSV EAVAEALRKI KHEQIEVRVI
HTGVGGINES DVMLAVASGA ITVGFNVRAD AKARDLAKRE QIDLRFYNVI YDLVDDISLA
LEGRLAPTVR EKVLGHAQVR EVFRITKIGN VCGCLVTDGI IQRNGKLRIL RQNVVVYEGP
VSALKRFKDD VKEVREGFEC GISIEKFNDV KVDDVLECYV EEQVKQTLS
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