| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_3611 |
|---|
| Symbol | |
|---|
| ID | 4483441 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | + |
|---|
| Start bp | 4536704 |
|---|
| End bp | 4537183 |
|---|
| Gene Length | 480 bp |
|---|
| Protein Length | 159 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 639724360 |
|---|
| Product | MucR family transcriptional regulator |
|---|
| Protein accession | YP_867502 |
|---|
| Protein GI | 117926885 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG4957] Predicted transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.987718 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.893759 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCATCGG ATATGGTTCA AAAAACCGCT CAAATTGTTG AAGCCTTTGT GCGCAACAAT
TCCATTACAG CCCGTGAAAT ACCCCAATTT ATCAAAGAAG TTCACGCATC TCTGACGGGG
CTCAGCCAGC CAGCCGACCC CCCCTTGGCA GCCCCTTCTG TGGTGGCCCC TAAGGTGGAA
TTAGCCCCTG TGCTGGTTGC TAACGAAGTG GGACAACCCA GCGGCAAACC TACCCCTGCG
GTGGCCATTG CCGATAGTAT TTCCGATGCC TTTGTAACCT GTCTGATTTG CGGCAAACCC
TGCAAAACCT TAAAAGGGCA CCTTACCCGC TCCCACCACT TGGAGCTGGA TGAGTACCGT
GCCATGTTTG ATCTACCCAC CAGCTACCCA GTGGTCTCCC CCGACTACTC GGCCAAGCGT
CGCAAGCTGG CCATTGATTC TGGACTGGGG GATAAACTGC ACAAGGCTCG CAAAAAATAG
|
|---|
| Protein sequence | MSSDMVQKTA QIVEAFVRNN SITAREIPQF IKEVHASLTG LSQPADPPLA APSVVAPKVE
LAPVLVANEV GQPSGKPTPA VAIADSISDA FVTCLICGKP CKTLKGHLTR SHHLELDEYR
AMFDLPTSYP VVSPDYSAKR RKLAIDSGLG DKLHKARKK
|
|---|
| |