| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_3596 |
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| Symbol | |
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| ID | 4483426 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 4516292 |
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| End bp | 4517098 |
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| Gene Length | 807 bp |
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| Protein Length | 268 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639724345 |
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| Product | hypothetical protein |
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| Protein accession | YP_867487 |
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| Protein GI | 117926870 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2165] Type II secretory pathway, pseudopilin PulG |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGGCC GTTTTGTTAA GTTACAGGCT CAACACGGTT TTACCATGAT TGAGCTCTCG
ATGGTATTGG TGGTTGTGGG GCTGTTGATT GCAGCCAGCA TCAGTCTGCT GCCCGGCACC
CAGCAATCCC TGGAATTAAA AGAGACCAAG AGCATCCTCA AAGAGATGAA GGCCGCCTTA
GTGGGCTACG CGGCAGCGAA TGGTCATTTA CCCTGCCCAG ATATGAATGC CACACCAGAT
GGCACGGAAG ATCGAACGGG TGCTGTGTGT GATGGTGCCG TGGGTTTTTT CCCCTATCGA
ACCTTGGGCT TAGGTAATGG GGTAGATGCC TGGGGTGGGC ATGTGGTCTA CGGCATTCAC
GATGCCAATG CACAAGGGGA TTTAACGGAC AACAGTGTGA ATATGTGCTT GGATACTTCA
GAGCTGGTGA AGCTTTCAAA ATTAGATCTG ATTAACGATC TCAATAGTGG TGTGCGCATC
AGTAAAATGA TTACCCAGGA TCTTGGTGCC AACCCCAGCA TCAATTTTAG CTGTGTGGAT
GCTGACAGTA TGGCCGTGGC GTTGATCTTG ATCAGCAAGG GTCCAACGGA TGCCAACGCC
AACGGGGATG GGGCCACCAC CTACACCAAA CGCTTTGACG GCAACAATGA AGATGTGTTG
GCAGATAGCT GTTTCGACAC TCCAGAGCGT GTGTGGTTTT TGCCGAATGT GGATACCACC
ACGGCGGTTC CCGCCACCAG TTATGATGAC GTGGTGGAGG TGATGGGTTT TACCTCGCTC
TACGCCAAAG CCTGTTTGAC ACCGTAG
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| Protein sequence | MSGRFVKLQA QHGFTMIELS MVLVVVGLLI AASISLLPGT QQSLELKETK SILKEMKAAL
VGYAAANGHL PCPDMNATPD GTEDRTGAVC DGAVGFFPYR TLGLGNGVDA WGGHVVYGIH
DANAQGDLTD NSVNMCLDTS ELVKLSKLDL INDLNSGVRI SKMITQDLGA NPSINFSCVD
ADSMAVALIL ISKGPTDANA NGDGATTYTK RFDGNNEDVL ADSCFDTPER VWFLPNVDTT
TAVPATSYDD VVEVMGFTSL YAKACLTP
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