Gene Mmc1_3577 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_3577 
Symbol 
ID4482093 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp4494730 
End bp4495248 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content48% 
IMG OID639724326 
ProductCheW protein 
Protein accessionYP_867468 
Protein GI117926851 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0835] Chemotaxis signal transduction protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGTCA GCACGTTTAC ACTAGGTGAT CTCTATCTGG GTATTGATAT TATCCTGGTT 
AGGGAGATTA ACCGTTCTAT GGAGTGTACA CCGGTACCGG GAGCCCCTAA TTATATACGC
GGGATGCTCA ATATACGCGG TCGGGTAATC ACGTTGTTTG ATCTTAAAAA TCGTTTAAGC
TGGTCCGACG ATCCCCGCAG TGGTGTTTTT AATGCGGAGA TCGGGAATGA TGGGAAGCCA
GCCAAGCAGT ACAATGTCAT CTTAAAAACG CGTAGTGAAG TAGCACAGAT TGACCGCGAT
ATTGCCATGA GCCGCTGCCC TTGGTCGGAT CCGGTGGGGT TGGTTGTTGA CCAGTTAGGT
GATGTGCGAG ATATTGTAGA TGATACCATT TTGCCCTCTC CGGCCAACCT GCGTGGGATA
TCTGCCGATT TTGTGCATGG TGTGGTAGAG TTTGAACGAA ACCTTCTGGT TATTCTTGAT
GTTGCTCAAG TTTTGGGATT TGAACAGAAC GCCGCTTAG
 
Protein sequence
MLVSTFTLGD LYLGIDIILV REINRSMECT PVPGAPNYIR GMLNIRGRVI TLFDLKNRLS 
WSDDPRSGVF NAEIGNDGKP AKQYNVILKT RSEVAQIDRD IAMSRCPWSD PVGLVVDQLG
DVRDIVDDTI LPSPANLRGI SADFVHGVVE FERNLLVILD VAQVLGFEQN AA