Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_3577 |
Symbol | |
ID | 4482093 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | + |
Start bp | 4494730 |
End bp | 4495248 |
Gene Length | 519 bp |
Protein Length | 172 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 639724326 |
Product | CheW protein |
Protein accession | YP_867468 |
Protein GI | 117926851 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0835] Chemotaxis signal transduction protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGGTCA GCACGTTTAC ACTAGGTGAT CTCTATCTGG GTATTGATAT TATCCTGGTT AGGGAGATTA ACCGTTCTAT GGAGTGTACA CCGGTACCGG GAGCCCCTAA TTATATACGC GGGATGCTCA ATATACGCGG TCGGGTAATC ACGTTGTTTG ATCTTAAAAA TCGTTTAAGC TGGTCCGACG ATCCCCGCAG TGGTGTTTTT AATGCGGAGA TCGGGAATGA TGGGAAGCCA GCCAAGCAGT ACAATGTCAT CTTAAAAACG CGTAGTGAAG TAGCACAGAT TGACCGCGAT ATTGCCATGA GCCGCTGCCC TTGGTCGGAT CCGGTGGGGT TGGTTGTTGA CCAGTTAGGT GATGTGCGAG ATATTGTAGA TGATACCATT TTGCCCTCTC CGGCCAACCT GCGTGGGATA TCTGCCGATT TTGTGCATGG TGTGGTAGAG TTTGAACGAA ACCTTCTGGT TATTCTTGAT GTTGCTCAAG TTTTGGGATT TGAACAGAAC GCCGCTTAG
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Protein sequence | MLVSTFTLGD LYLGIDIILV REINRSMECT PVPGAPNYIR GMLNIRGRVI TLFDLKNRLS WSDDPRSGVF NAEIGNDGKP AKQYNVILKT RSEVAQIDRD IAMSRCPWSD PVGLVVDQLG DVRDIVDDTI LPSPANLRGI SADFVHGVVE FERNLLVILD VAQVLGFEQN AA
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