Gene Mmc1_3568 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_3568 
Symbol 
ID4482084 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp4479356 
End bp4480354 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content51% 
IMG OID639724317 
Productflagellar motor switch protein FliM 
Protein accessionYP_867459 
Protein GI117926842 
COG category[N] Cell motility 
COG ID[COG1868] Flagellar motor switch protein 
TIGRFAM ID[TIGR01397] flagellar motor switch protein FliM 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCAAA TTCTATCCAC TGATGAAATT GATGCCCTAA TGATGGGGTT GGAGGAGGGC 
ACCATTGATC TGGATGAGAT CGATGAGGAT ATGCCATCTG CCTCCAAGGA TGAAAAAAAG
ACCACGCCTT TTACCTTTGG CCAGAAGACG GCCATTCGTG TGGGTGCATT ACCGGGTCTG
GATCTGATTA ACGAGCATTT GGCGTCGCAG TTATCGTTTA AGCTGACGCA AAAGGTCGGG
CGCGAGGTGC ATGTGCAGCC CAAGACCACG ACCAACCAGG TATTTGGTCG TTTTCTGCAT
ACGGTCGAGC CGCCGATCTT TATCAATATT TTGCGGGTTG AGCCTTCGCA ATCCATGGCA
TTGATCTCCA TTGATGGGGA TGTGATGTAC ACGGTATTGG AAGGTTTTTT TGGGGGTCCT
GGTGACAGTG AGCGGCCATT CCGCAATTTT TCACCTTTTG AGATGAAGGT GATTGACCGC
ATCATGGATG TGGCGCGGGA GCAGATTGAG CTGTCGTGGA AAAAATTGGA TCCCTCTTTC
CGTTTGGTAT TGGCGCGGTG GGAGAATCAG CCGCAGTTTG CGGCGGTGAT GCCCCTGGAC
GAGACGGTAT TTTTGATTAC CTTTTCGGTC GAGGTAGGGG ATGCGGAGGG TAACATTACC
ATCTGTTTTC CGGCGGTTAT TTTGGAGCTC TTCAAGCAGC AGCTCAAGCA GGGTTTCCAG
CAGAAGGAGG AGGTGGAGGG TGCCTCGGCC TGGATGGATG CGCTTAAGAA TGAGCTGAGT
TTGGTGCGGG TGGACATGAC ACCGGTGATG GGTACGGTGG AGATGTCGGT GGAGCAGATG
TTAAATCTTA AAGTGGGTGA TGAGTTTATA CTGGGCACCG ATATGTCCGA GGAGATGGCT
GTTCAGATTG GTGGCATGGA CAAGTTTATG TGTCATGCTG GGGTTGTGGA TGGTAAGCGG
GCGATTCGGA TTACACGGAC GGTTCAGCCG CAAAAGTGA
 
Protein sequence
MSQILSTDEI DALMMGLEEG TIDLDEIDED MPSASKDEKK TTPFTFGQKT AIRVGALPGL 
DLINEHLASQ LSFKLTQKVG REVHVQPKTT TNQVFGRFLH TVEPPIFINI LRVEPSQSMA
LISIDGDVMY TVLEGFFGGP GDSERPFRNF SPFEMKVIDR IMDVAREQIE LSWKKLDPSF
RLVLARWENQ PQFAAVMPLD ETVFLITFSV EVGDAEGNIT ICFPAVILEL FKQQLKQGFQ
QKEEVEGASA WMDALKNELS LVRVDMTPVM GTVEMSVEQM LNLKVGDEFI LGTDMSEEMA
VQIGGMDKFM CHAGVVDGKR AIRITRTVQP QK