Gene Mmc1_3533 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_3533 
Symbol 
ID4480384 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp4431400 
End bp4431780 
Gene Length381 bp 
Protein Length126 aa 
Translation table11 
GC content47% 
IMG OID639724282 
Producthypothetical protein 
Protein accessionYP_867424 
Protein GI117926807 
COG category 
COG ID 
TIGRFAM ID[TIGR00377] anti-anti-sigma factor 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGAATC GGAGACCCAT CCAGATTGTT CAACAAAACA ACGGCACTTT CATAAAACCC 
CCTCAACGAT TTGAGGTTTC CTGCCACAAT GAATTTTTGC GTGCCATTGA ACCGCTCGCG
CAGGTACCAC TTTATTTAGT CGATCTTACT GAGACCAGTT ATATCGACAG TGCAGGGTTG
GGTATGCTGC TTTTACTCCG TCAACGGTTT TGCAGCGACA CCGCGCGTGT TGAGCTGCAC
ATCATACCGG GTCATGTACA GAAGGTACTG GCGATATCCC GGTTTGATCA GCTTTTTACC
TTAGTTATGC ACGAACAACC CATTGTTCAT GATCCCGAAA CATTGGCCAT GCCCCTGCTA
CAAAGCGCTG GATTGTATTA A
 
Protein sequence
MQNRRPIQIV QQNNGTFIKP PQRFEVSCHN EFLRAIEPLA QVPLYLVDLT ETSYIDSAGL 
GMLLLLRQRF CSDTARVELH IIPGHVQKVL AISRFDQLFT LVMHEQPIVH DPETLAMPLL
QSAGLY