Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_3520 |
Symbol | |
ID | 4481118 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | + |
Start bp | 4401720 |
End bp | 4402442 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 639724269 |
Product | CRISPR-associated Cas5 family protein |
Protein accession | YP_867411 |
Protein GI | 117926794 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01876] CRISPR-associated protein Cas5, Dvulg subtype [TIGR02593] CRISPR-associated protein Cas5, N-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTAGAC AGAGAAACGA CTTAGAGTTT TTACTCACCG CCCGCTATGC CCTGTTTACC GACCCTTTGA CCCGTGGCGG CGGGGAGAAA CTCTCCTACC ACATTCCCAC CTACGAAGCC CTAAAGGGGA TCTGTAAATC CATCTATTGG AAACCCACGC TTATCTGGGT CATTGATGAG GTCAGGGTTC TCAATCGTAT TCAAACCCAA ACCAAGGGCG TCAAACCCCT TAAATTCAGT GGGGGTAATG ATCTCTCCAT CTACACCTAT CTGGCTGATG TGGCCTATCA GGTGCGGGCC CATTTTGAGT GGAATATGCA CCGCCCAGAG CTAGCCAGAG ATCGTATCGA GGGCAAACAT TTTAATATCG CCCGCCGCAT GCTGGAACGG GGGGGACGCC AGGATATCTT TTTGGGTACC CGTGAGTGCC AAGGTTATGT AGAACCCTGT GATTTTGGTC ATGGTGAGGG ATTTTATGAT AACGCGGGGG AATTGGCCTT TGGTCACATG TTCCATGGTT TTGACTATGC CGACGAGATC GGTAAAAACA GTCTGCACCG CCGCCTGTGG AGCCCAACCA TGAAAAATGG CTATATCCAC TTTCCCCGCC CCGAAGATTG CCCCGTGCAT GAGTTTATTC GAGGGATGCA AGCCAAAACC TTTGACGATA CCAACCTCTT AGATGTCGAG CAGGAAGAGG CTCTTTTGGA GGCCCAGCTA TGA
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Protein sequence | MSRQRNDLEF LLTARYALFT DPLTRGGGEK LSYHIPTYEA LKGICKSIYW KPTLIWVIDE VRVLNRIQTQ TKGVKPLKFS GGNDLSIYTY LADVAYQVRA HFEWNMHRPE LARDRIEGKH FNIARRMLER GGRQDIFLGT RECQGYVEPC DFGHGEGFYD NAGELAFGHM FHGFDYADEI GKNSLHRRLW SPTMKNGYIH FPRPEDCPVH EFIRGMQAKT FDDTNLLDVE QEEALLEAQL
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