Gene Mmc1_3520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_3520 
Symbol 
ID4481118 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp4401720 
End bp4402442 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content51% 
IMG OID639724269 
ProductCRISPR-associated Cas5 family protein 
Protein accessionYP_867411 
Protein GI117926794 
COG category 
COG ID 
TIGRFAM ID[TIGR01876] CRISPR-associated protein Cas5, Dvulg subtype
[TIGR02593] CRISPR-associated protein Cas5, N-terminal domain 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTAGAC AGAGAAACGA CTTAGAGTTT TTACTCACCG CCCGCTATGC CCTGTTTACC 
GACCCTTTGA CCCGTGGCGG CGGGGAGAAA CTCTCCTACC ACATTCCCAC CTACGAAGCC
CTAAAGGGGA TCTGTAAATC CATCTATTGG AAACCCACGC TTATCTGGGT CATTGATGAG
GTCAGGGTTC TCAATCGTAT TCAAACCCAA ACCAAGGGCG TCAAACCCCT TAAATTCAGT
GGGGGTAATG ATCTCTCCAT CTACACCTAT CTGGCTGATG TGGCCTATCA GGTGCGGGCC
CATTTTGAGT GGAATATGCA CCGCCCAGAG CTAGCCAGAG ATCGTATCGA GGGCAAACAT
TTTAATATCG CCCGCCGCAT GCTGGAACGG GGGGGACGCC AGGATATCTT TTTGGGTACC
CGTGAGTGCC AAGGTTATGT AGAACCCTGT GATTTTGGTC ATGGTGAGGG ATTTTATGAT
AACGCGGGGG AATTGGCCTT TGGTCACATG TTCCATGGTT TTGACTATGC CGACGAGATC
GGTAAAAACA GTCTGCACCG CCGCCTGTGG AGCCCAACCA TGAAAAATGG CTATATCCAC
TTTCCCCGCC CCGAAGATTG CCCCGTGCAT GAGTTTATTC GAGGGATGCA AGCCAAAACC
TTTGACGATA CCAACCTCTT AGATGTCGAG CAGGAAGAGG CTCTTTTGGA GGCCCAGCTA
TGA
 
Protein sequence
MSRQRNDLEF LLTARYALFT DPLTRGGGEK LSYHIPTYEA LKGICKSIYW KPTLIWVIDE 
VRVLNRIQTQ TKGVKPLKFS GGNDLSIYTY LADVAYQVRA HFEWNMHRPE LARDRIEGKH
FNIARRMLER GGRQDIFLGT RECQGYVEPC DFGHGEGFYD NAGELAFGHM FHGFDYADEI
GKNSLHRRLW SPTMKNGYIH FPRPEDCPVH EFIRGMQAKT FDDTNLLDVE QEEALLEAQL