| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_3502 |
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| Symbol | |
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| ID | 4483029 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 4372083 |
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| End bp | 4374047 |
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| Gene Length | 1965 bp |
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| Protein Length | 654 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639724250 |
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| Product | cytochrome c assembly protein |
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| Protein accession | YP_867393 |
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| Protein GI | 117926776 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1138] Cytochrome c biogenesis factor |
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| TIGRFAM ID | [TIGR00353] c-type cytochrome biogenesis protein CcmF |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGGATAG AAGTTGGACA TTATGCCGCC ATCCTGGCGT TGCTGCTGAG TATTACCCAA
ATGGTCACCC CTATGGTGGG CATACGCAGT GGTCAGATGG CCTGGGTCAG GGTTGGTCGC
TACAGCGCCT TTGCGGTGTT TTTGCTCTTG AGCGTAGCCA GTGGCACACT GATACACGCC
TTTATGAGCC ACGATTTTTC CGTGCTCTAT GTGGCCCGCA ACTCTTCCTT GAGCCTGCCA
TCCTTCTATT TGGCCACCGC CATGTGGGGG GGACATGAGG GCTCTTTGTT GCTGTGGGCT
TGGTTAATGT CCTTTTTTAT TGCCGTTGCA GCATGGCGCC ACTGGAACAC CCACTCGGTC
TCGATGCCCT GGATTTTGAC CATTCTAGGG GCCGTGACCC TGGGTTTTCT GTGCTTGGTA
TTGCTGCTCT CTTCGCCCTT TGAGCGGCTG TTTCCCATCC CCATGGATGG ACGGGATCTT
AATCCGCTGT TGCAAGATCC TGGTATGGTT TTTCACCCCC CCTTTCTCTA TCTGGGTTAT
GTGGGTTTTG CGGTTCCCTA TGCCTTTGCC ATGGCGGCAC TGATAACCGG ACAGGCCAAG
GATGAGTGGA TCTTGGCAAC CCGGCGCTGG ACCCTGTTTG CCTGGACCAT GCTTACGACG
GGCATCGTGT TTGGTGCCTA CTGGGCCTAT TATGAGCTGG GCTGGGGCGG CTATTGGGCT
TGGGATCCGG TGGAGAATGC CTCTTTCATG CCCTGGTTAA CCGGTACCGC CTTTTTGCAT
TCGATCATGG TGCAAGAGCG CCGCCAGATG TTTAAGGTAT GGAATCTATT CCTGATTATC
ACCACCTTTT CGCTCTCACT GCTGGGTACC TTTTTGGTGC GTTCGGGGGT GCTTAGTTCG
GTACATGCGT TTGCTACCGA CCCGGGCCGG GGTATGTTTA TTTTAAGCTT TATGGCGGTT
ATGTTGCTGT TTAGCTTTGG TGTGCTGGTG TGGCGAGCCG ATGCCTTAAA AGCGGAAAAC
CGCATGGACG CGGTGGTGTG TCGCGAGAGC ACCTTCTTGT TTAATAACCT GTTCCTGTTG
GTTGGGGCGA TCACGGTGCT GCTGGGCACC CTCTACCCGC TCGCTTTGGA AGCGTTGATG
GATGCCAAGG TCACGGTGGG CCCCCCCTAC TTTAACAAGG TGTTTGTGCC GATTATGCTG
GGCCTGCTTA TTCTGATGGG CATTGGTCCC TTGATCTCTT GGCGGCGGGC CGCCCAGGGA
CAGTTAAAAA AGAACTTTTT GGTGCCGGGT CTGTTGGCCT TGGTGGGGAT TCCTATCGCC
CTGCTCTTGG GTGTGCAGCA CCCTTACGCC ATTGTTACGG TGATGATCAT TCTGTTTGTG
GGCAGCACCC ACCTTATTGA TGTACAGCGG GGCGTTGCGG CTCGCCTTCA AGCGGGTAGC
CACAACCCCA TTTCTGCTTT CGTTAAAATG GTCGCCCGTA ACAAGCGCCG CTACGGTGGC
CTGACGGTGC ATATTGGCAT TCTGGTTATG TGCGCGGGTT TTATTGGCAG TGGCATGTTC
CAGGAGGTTC AGACCGTCAT TATGCAACCC GGCGATAAGG TACGCCTTTC GGGTTGGGAG
CTGACCCTGG AAAAGTACCA TCAGGTGCGT AAAGATAACT GGACAGCAAC CGAAGCGGTG
ATGCATGGCG TGCGGGAGGA TGGTCTGACC GTCAGCTTGC ATCCCCAAAA ACGTAAGTAT
GATAACCATG AGATGGAGAC CACCGAGGCC TCCATTATCA ACTTTTTCTG GGAAGATCTC
TATGTGGTGT TGGGAGATCG CATCCCTGGC AAGGGGTGGG CCATTAAAGC CTACCGCAAC
CCCTTGATTA GCTGGGTTTG GTATGGCTCC TTCATCATCG CGGCGGGGGC TATACTGGCA
CTCTTCCAGG GACGCCGTTT TAAACGCATC CAGGGGGCCT CTTAG
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| Protein sequence | MWIEVGHYAA ILALLLSITQ MVTPMVGIRS GQMAWVRVGR YSAFAVFLLL SVASGTLIHA
FMSHDFSVLY VARNSSLSLP SFYLATAMWG GHEGSLLLWA WLMSFFIAVA AWRHWNTHSV
SMPWILTILG AVTLGFLCLV LLLSSPFERL FPIPMDGRDL NPLLQDPGMV FHPPFLYLGY
VGFAVPYAFA MAALITGQAK DEWILATRRW TLFAWTMLTT GIVFGAYWAY YELGWGGYWA
WDPVENASFM PWLTGTAFLH SIMVQERRQM FKVWNLFLII TTFSLSLLGT FLVRSGVLSS
VHAFATDPGR GMFILSFMAV MLLFSFGVLV WRADALKAEN RMDAVVCRES TFLFNNLFLL
VGAITVLLGT LYPLALEALM DAKVTVGPPY FNKVFVPIML GLLILMGIGP LISWRRAAQG
QLKKNFLVPG LLALVGIPIA LLLGVQHPYA IVTVMIILFV GSTHLIDVQR GVAARLQAGS
HNPISAFVKM VARNKRRYGG LTVHIGILVM CAGFIGSGMF QEVQTVIMQP GDKVRLSGWE
LTLEKYHQVR KDNWTATEAV MHGVREDGLT VSLHPQKRKY DNHEMETTEA SIINFFWEDL
YVVLGDRIPG KGWAIKAYRN PLISWVWYGS FIIAAGAILA LFQGRRFKRI QGAS
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