| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_3446 |
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| Symbol | |
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| ID | 4483178 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 4303732 |
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| End bp | 4304670 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639724194 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_867337 |
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| Protein GI | 117926720 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000000932924 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGGTATT CAGTGAAAGA AGGACTGAAC AAATTCGACC TTAATCTTTT GGTAGCTTTT
GATGCACTGA TGAGTGAGCG TGGGGTGACC CGTGCTGGAC GTCGTTTGGG CATTACGCAG
GCTGCTATGA GTAATACTTT GCGGCGTTTG CGCACCGCTT TTGATGATCC GCTGTTTATC
AAAACCGGGG CACGTATGGA GCCGACTCCC CGGGCTATGG AGTTGTCGGG CATGATCGAA
GCGGCGTTAA AGCAGGTGCA CGTGGCCCTG GATAACGACA GTTTTGATCC GGCCAACTCC
CACTATGTGT TTCGGGTGGG TATGGTGGAC TATACGGTGC CGTTGGTGTT TCCGGCGCTG
TTGGATCATT TGGAAAAGTA TGCCCCCAAC TGCATCCTTG AGGTGGTCAA TACCGGTGAT
TTTGAAGGGG AGATGCTTGA GTCGGGTGAG GTGGATCTGG TGCTCAGCCG GTTGGATCAA
GCCCCCCGGG GATTAAAATC GCGTGTGGTG GGGGAGATCC CGTTTGTCTG CATCTATCGC
CCGGGCCATC CCTTAATCAA AGAGCCTATG ACCCTGGAGC AGTATCTGCA AGCTCGCCAT
GTGCACTATT ACCCACCCAT GGTCAAAGAG GGTTTGGTCG ATTTAGGTTT AAAGGCGATC
AATCAAGAGC GGAATGTGGT GGTGCGGTTG GACTCGTTTG GGATGGTGCC AACTTTGGTG
GCTGAAACCG ATCTGATTGC CGCTGTCACC CACACCTCGG CCCATGTGAT TGCGCCGGCT
ATGGGGCTAA AAGTGCAACC GCTACCCTTT GAGGCACCGC CGCTGCAGTT TGTTATGGTT
TGGCATGATC GTTCTGAAGA GAGCGCCCCG CACCAGTGGT TCCGGGAGCA GGTACTGCAC
ATGTTGATCT CTTTGGAGGG GATGGTAGGC AAGGTATAA
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| Protein sequence | MGYSVKEGLN KFDLNLLVAF DALMSERGVT RAGRRLGITQ AAMSNTLRRL RTAFDDPLFI
KTGARMEPTP RAMELSGMIE AALKQVHVAL DNDSFDPANS HYVFRVGMVD YTVPLVFPAL
LDHLEKYAPN CILEVVNTGD FEGEMLESGE VDLVLSRLDQ APRGLKSRVV GEIPFVCIYR
PGHPLIKEPM TLEQYLQARH VHYYPPMVKE GLVDLGLKAI NQERNVVVRL DSFGMVPTLV
AETDLIAAVT HTSAHVIAPA MGLKVQPLPF EAPPLQFVMV WHDRSEESAP HQWFREQVLH
MLISLEGMVG KV
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