Gene Mmc1_3444 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_3444 
Symbol 
ID4483176 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp4300607 
End bp4302142 
Gene Length1536 bp 
Protein Length511 aa 
Translation table11 
GC content51% 
IMG OID639724192 
Productperiplasmic sensor signal transduction histidine kinase 
Protein accessionYP_867335 
Protein GI117926718 
COG category[T] Signal transduction mechanisms 
COG ID[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0299421 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTTTTC AAATGAGTAT TCAATTTAGA ATAAGTGTGG CGGTACTGTT GGGTTTGGTG 
CTGTCCTCGT TGGTGGGTGG GGTCAGCCTC TATGAAATGA GCAGAATTCG TGGCCAAATT
CAGGAGATCG CCAAAACCGA ACTGCCGTTA ACGGAAATTT TAACGCAGGT TGAAAATCTG
CATTTACAGC AAGCCCTTTT ATTAGAGCGC GCCTACCGTT ACGGGGTAAG CAAGCAGCCG
GCAACCGTGA GCGCGTTACA CAACCAATTT GCACAGACCG CAGGCCGGAT GGGGCAACTG
CTGCAAGAGG GGCGGGCGCT GGCTCTTGGT GCGGTAACGA CGACAGCTGC TACCCAGGCA
CGCCAAACTT TTCAGGGGAT CGCGCAAAGT TTACGGGTGT TAGCACAAAA CCATGAGCAG
CTCGGTCAAT TGGTGATGGA AACCTTGGTC AAGATTCATG GCGACGCGGT GGCCCAGACG
GACCATCTCT TCCAACGTAT TGAAAGCCAA GAGTTGGCCC TGATTACAGC GCAAAACCAG
TTAAAAGGGC AATTGGCGAG CATGCTACAA GAGAGCGCCC AATATGCGGT CTATAAAGAG
GAGCAGGGCA TCTATCTCAT TGGCTTATTG CTGGGGATAA GCGTGGTCGT TGGGTTGCTC
TTCTCCTGGC GCATTTCCAA GGAGATTATT CAACCCTTAA CCGAGGCGGC GCAGATCGCT
GACCGTATCT CTGAAAACCA GTTGGATATT GAGACCCCCA AGGGCCAACT ACCGGAGATG
AAGCGGTTGT TCAGAGCCAT GACCTACATG GTCACAGCCT TGAAAGAGCG ACAACGGCTG
GAACAACTGC TCTTGATTTC GGAAAAAATG TCCTCCATAG GACGGCTTAC CGCAGGCATT
GCGCATGAGA TTAATAATCC ATTGGCCTCG GCATCTATGG GGGTGCAAAC GCTAAAAACC
CTGTTGGGTG AGTCGCCGTC ATTGGATGTA AGTAAGCGGA TAGACTCTAT TGAGCGAAAC
CTGGACCGCG CCGCCACGAT TGCACAAGAG ATGCTAGTCT TCTCTCGTTC CGAATCCAGC
AGCTTGGTGC CCATCGATCT GCAAGAGCAA GTAGAGGGTG CTTTAACCTT GTTAAGCCAT
AAACTAAAAG ATGTTACTGT GGTGCAGCAG TGGCAGCAGG ATATGCCCGA GGTGTGTGGT
GATTTTGTGC GTTTAGAGCA GGCCTTTATG AACATTATGT CCAATGCGCT GGATGCCATG
GCCGAGGGAG GGTGCATGGA GATTGTGGGA GAGCGGGATG AAGAGGGGGC AATGGTGCGC
ATTACCGACC ATGGGCAGGG TATTGCGCCA GAGTTGTTAT CCCGCGTGTT TGATCCCTTT
TTTACCACCA AGGAGGTGGG TTTGGGTACA GGGCTAGGAC TATCCATTTG TTATAATACG
ATTTTGGAAC ATCGTGGCAG CATTGAAATT ACCAGTGAAG TAGGGGTGGG GAGCTGTGTG
ACGGTAAGAT TGCCGGTACG CCAAGGGGAT TGCTAA
 
Protein sequence
MRFQMSIQFR ISVAVLLGLV LSSLVGGVSL YEMSRIRGQI QEIAKTELPL TEILTQVENL 
HLQQALLLER AYRYGVSKQP ATVSALHNQF AQTAGRMGQL LQEGRALALG AVTTTAATQA
RQTFQGIAQS LRVLAQNHEQ LGQLVMETLV KIHGDAVAQT DHLFQRIESQ ELALITAQNQ
LKGQLASMLQ ESAQYAVYKE EQGIYLIGLL LGISVVVGLL FSWRISKEII QPLTEAAQIA
DRISENQLDI ETPKGQLPEM KRLFRAMTYM VTALKERQRL EQLLLISEKM SSIGRLTAGI
AHEINNPLAS ASMGVQTLKT LLGESPSLDV SKRIDSIERN LDRAATIAQE MLVFSRSESS
SLVPIDLQEQ VEGALTLLSH KLKDVTVVQQ WQQDMPEVCG DFVRLEQAFM NIMSNALDAM
AEGGCMEIVG ERDEEGAMVR ITDHGQGIAP ELLSRVFDPF FTTKEVGLGT GLGLSICYNT
ILEHRGSIEI TSEVGVGSCV TVRLPVRQGD C