| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_3423 |
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| Symbol | |
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| ID | 4483875 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 4273718 |
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| End bp | 4275436 |
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| Gene Length | 1719 bp |
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| Protein Length | 572 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639724172 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_867315 |
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| Protein GI | 117926698 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAATTTA CGGAACTCCC CATTCCCGAA CCGGTTTTGG CCGGCATACG CGACTGTGGT
TTTACCCAGT GTACCCCCAT TCAAGCCTTA ACTTTGCCAC TGGCTTTGGC CGGTAAAGAT
GTCGCTGGAC AAGCCCAAAC CGGTACCGGC AAAACCGCTG CTTTTCTGAT TGGCGCCCTC
TCTCATCTGG TCACACACCC CCGCAAACAT GGGAAACCCG CTGGTCAAAG TCTGCCGCGC
ATTCTGGCTG TTGCGCCTAC CCGCGAGTTG GTGGCACAGA TCGAGTCGGA CGCCAAACTG
CTCAACGCCC ACACCCAATT TAAGTTGCAC TGTGTCTACG GTGGGGTGGA TTATGAAAAG
CAAAAACGCA TCCTTATGGA GGAGGATGTG GAAATTTTGG TGGGCACGCC GGGACGTTTG
ATCGACTATT TTAAGCAAAA TGCCTACGGC CTCAAAGGGG TCGAAGTCCT GATCGTGGAT
GAAGCCGACC GTATGTTTGA TATGGGCTTT ATTGATGATC TGCGCTACAT GTTGCGCCGC
TTGCCCCACT ATAGTGAGCG GCTTTCTATG CTCTTTTCGG CGACCCTCTC CTACCGTGCC
CAGGAGATGT CTTACGAATA TATGAACATG CCCGAGGTGC TCAGCACCAC GGTGGATGTG
AAAACGGCGG AGCGGGTGGA GCAAAAGCTC TACCATGTGA GCGGTGATGA GAAGATTGCG
CTCTTGGTGG GGTTGCTGCG GGATATTTTG CAGCATGAGG GCATTGATTT GAGCCAGCCA
GCCATGCTTG AGTTGGATGA CAACGGTGAT GAAATCGTTG AACCCAATGG GGCCATGTTG
AGTGGCGATG AGCCCAGCAC CGAGAGTGAA CCCTTTGTGC CCCACCCGGA TGATCTGGAT
ACCGAGGATG CCGCCCGTGC AGCCGAGGCG GCCTTGGCCA ACGCACAAAA AACCCCACCG
GGGCGTAGCA TGGTGTTTGT CAATACCAAG CGGGCTGGGG AGCGGGTGGA GCGTTGGTTG
AAGGCCAATG GCATTCAAGC GGGTTATCTC TCTGGGGATG TACCGCAAAT GAAGCGCCTA
AAGGTGCTCA AGCGGTTTCA GGATGGCGAA TATCCGGTCC TGATTGCCAC CGATGTGGCG
GGTCGTGGTC TGCACATTGA TGGGGTGACC CATGTGATCA ACTATGACCT GCCGGACAAT
GCCGAAGATT ATGTACACCG CATTGGGCGC ACCGCCCGGG CCGGTAATCG GGGTGATGCC
ATTGCTCTTG TGGATGAAGA GGGTGCCTAC TCGTTAGAAG CGGTACAGGC CTATATTGGC
ATGACCATCC CGATTGTCTG GGCTGAGGAT GATCTGTTTG CCGATCTGGT GCGTCCGCCA
CCACGGCCCC GCAGCGAGCG GGATATGCGT CGTACCGGTG GTGGCCGTAG CGGCAGCGGC
GGCAGTCGCT CGGGTAGCGG TGGTGGTCGT GCCGGTAGTG GCGGCAGCCG TTCGGGCAGT
GGTAGTCGTG CTGGTGCGGG TCGTGCGGTA GGTGGTAGCC GTTCCACGGC TGGTGGGGTC
AGCCAGGGGG CGAAGCCCTC TCATCATACA CCGGCTGCGG CGGCTCATGT GGCTGTGCCT
GCGGGCAGTG AGGGCGGTGG CGAAGCGGTT AAGAAAAAGC GGCGCCGACG CCGTCGTAAG
CCTGGGGTGC AAACGCCGGC TACGGGTGGT GAGGCGTAA
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| Protein sequence | MEFTELPIPE PVLAGIRDCG FTQCTPIQAL TLPLALAGKD VAGQAQTGTG KTAAFLIGAL
SHLVTHPRKH GKPAGQSLPR ILAVAPTREL VAQIESDAKL LNAHTQFKLH CVYGGVDYEK
QKRILMEEDV EILVGTPGRL IDYFKQNAYG LKGVEVLIVD EADRMFDMGF IDDLRYMLRR
LPHYSERLSM LFSATLSYRA QEMSYEYMNM PEVLSTTVDV KTAERVEQKL YHVSGDEKIA
LLVGLLRDIL QHEGIDLSQP AMLELDDNGD EIVEPNGAML SGDEPSTESE PFVPHPDDLD
TEDAARAAEA ALANAQKTPP GRSMVFVNTK RAGERVERWL KANGIQAGYL SGDVPQMKRL
KVLKRFQDGE YPVLIATDVA GRGLHIDGVT HVINYDLPDN AEDYVHRIGR TARAGNRGDA
IALVDEEGAY SLEAVQAYIG MTIPIVWAED DLFADLVRPP PRPRSERDMR RTGGGRSGSG
GSRSGSGGGR AGSGGSRSGS GSRAGAGRAV GGSRSTAGGV SQGAKPSHHT PAAAAHVAVP
AGSEGGGEAV KKKRRRRRRK PGVQTPATGG EA
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