Gene Mmc1_3368 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_3368 
Symbol 
ID4482810 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp4198407 
End bp4199336 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content51% 
IMG OID639724116 
Producthypothetical protein 
Protein accessionYP_867260 
Protein GI117926643 
COG category[S] Function unknown 
COG ID[COG2326] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0275046 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACTG AGAACCCAGA TTATGTCATT GTGGACGGCA AAAAAGTGGC GGTAGAAGAG 
CTGCTGCGGG ACAACCGGCG TCTTAGTGAT GAGAACAGCC GCTTGCGTCA GAGCTTTAGT
GACTATAAGC GCAAAGCGGA TAAAGCGATG CTGCGTCACA AACAGGAGCG CAGCTTAAAG
CCTTATCAGG CAGAGCTTAT CAAGCTGCAA AACTATTTAG AGCACGAACA GCTCAAGATG
GTTGTGCTAT TTGAGGGGCG CGACGCAGCC GGAAAGGGTG GCACCATTCG CCGTGTAACC
CGTTATATGA ACGAAAAGCA CTATCGTGTG GTTGCCCTGG GCAAACCCAC GGAGGAGCAG
AAAACCCAGT GGTATTTTCA GCGTTATGTC ACCCAGCTAC CCACAGGGGG CGAGTTGGTG
CTGTTTGACC GTAGCTGGTA TAATCGCGCG GTGGTAGAGC CCATTTTTGG ATTTTGTACG
GAAGAGCAGT ACCACCATTT TATGGATGGT GTAACCTCGT TTGAGAAAGA TCTGGTGAAT
GGTAACACCA TTTTGGTCAA ACTCTACTTC TCTGTGACCA AAGATGAGCA GGCCAACCGT
TTTGAGCGGC GTCAAACCGA CCATCTGCGT CAGTGGAAGC TTTCTGAAAT TGACATGCAG
GCCCAAGAGC GCTGGTACGA TTTTACTTTG ATGAAATATC GCATGCTCAA GGGCACCCAC
ACACCCTGGG CGCCTTGGAC GATTATCCGT TCCAACGATA AATATTTGGC CCGTTTAAAC
GCCATGCTGG CCATTCTTAA CTCCGTTCCC TACGAGGGGC GAAATCCTGA ACTGGACTAT
GTTCCCCATC CTGAGGTGGT GGTTTCTGGA GCGCGTGAGA TTGAGTTGAT GGAGCGTGAG
CTTATTCGCG CGGGTATGTT TACCCACTGA
 
Protein sequence
MNTENPDYVI VDGKKVAVEE LLRDNRRLSD ENSRLRQSFS DYKRKADKAM LRHKQERSLK 
PYQAELIKLQ NYLEHEQLKM VVLFEGRDAA GKGGTIRRVT RYMNEKHYRV VALGKPTEEQ
KTQWYFQRYV TQLPTGGELV LFDRSWYNRA VVEPIFGFCT EEQYHHFMDG VTSFEKDLVN
GNTILVKLYF SVTKDEQANR FERRQTDHLR QWKLSEIDMQ AQERWYDFTL MKYRMLKGTH
TPWAPWTIIR SNDKYLARLN AMLAILNSVP YEGRNPELDY VPHPEVVVSG AREIELMERE
LIRAGMFTH