| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_3361 |
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| Symbol | |
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| ID | 4482803 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 4187110 |
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| End bp | 4189362 |
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| Gene Length | 2253 bp |
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| Protein Length | 750 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639724109 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_867253 |
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| Protein GI | 117926636 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3914] Predicted O-linked N-acetylglucosamine transferase, SPINDLY family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.311751 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCATGC CCCAGCACGA TCCCCTCGGC ACAGCCCTAA GCCAAGCGAT GCAACAGGGC
CGTTTTGCCC AAGCCCTCCA GCAGGCCAAC CGACAGCTCA AAAAGCCGGG GCCACACCCT
TATGCCCTCT GGCAACTTGC CGCCCAAGCA GCGGAAAAGC TGCATGACAT ACCCCAAGCA
GAGCGTTTAT GGCGCATGGC CATCACCGCC CCCGATCAGC AGGGGCAAGC GCTGGTGGGA
TTGGGCGAAC TGCTGGAAGA GGCCCAACGC CTGCCAGAGG CGCACACGGC CTTTCGCACC
GCCCTCGGGT TTAATCCGCA CCTGGGCAGC GCCCACCACG GACTTGGCCG CTTATTGGAG
GGCGCCGGGG AGCTCCAAGC TGCCCTCCAA TGTTACCAGC AAGCTGTCAC CTTGGAGGGG
GGGCTCAATA GCGCCCGCTT TCGCTTGGGC CGTCTGTGGC AACGTCTGGG CGAACCGCAA
CAGGCCAAGC AAGCCTTTGC CGAGATCCTT AGCCAACACC CCCATTTTTA TCTGGCCCGT
TTGCATCTGG CCGAGTGTCA GCAACGCTTG GGGGAAGCCC AACAGGCCGA GCAGAACTAT
CTGCTGGTCA TCCAGCAGCA AGCCAGCCTG CCCGAGGCCC ACAACCAACT GGCCAATCTC
TATACCGATC AACGACACTT TGCCCAGGCC ATTCACCACT ATCAGGCCGC CATTGAGCTA
CGTCCCAGCG TGGCGATGTT TCACTATAAT TTGGGTTACG TCTATCTGCT GCAAAATGAC
CATGCCACGG CAGCCCAGCA CTATAGCAAC GCCTACCGGT TGGATCCCCA GTTAGGCGGC
GCACTGGGCA GCATGATCTT GTGTGATATG ATGCTCTGCC GTTGGGACCG CCTAGAGGCG
CACATTGCCG GGGTTAAGGC ACTGCTTGGG GGGGAGCGTG CCCAACACGC GCCCCCACTG
GTCCCCTTTA TTACCACTTA TCTACCCCAA ATCGGTGCCG CTCTACAGCG TCAAGCGGGG
GCACAGTTTA CCCAGCTCTC CTTTGGCGCT ATTATGGCGC AGCCCCCCTT GGCTGCGGCC
CATCGCCCCC GCGCCACGGG TAGCCCCCTG CGCATTGGTT ACCTCTCTGC GGATTTTCGC
AACCATGCCA TTTCGCGCTT AGCCATCGGC GTGTTGGAAG GGCATGATCG CCGCCAATTT
ACCCTTACCG CATTTGCCAT TGGCCCCGAC ACCGACGATG CCATGCGCCA GAGGGTCAAA
CAGGCAGTAC ACCACTTTCA TCTCATCGGT CATTTAGATG ACGCTGCCGC AGCCCGCTTC
ATTGCCGCCC AAGAGATCGA TATTTTGGTG GATATGATGG GCTACACCAC CCATGCCCGA
CCCGGAATTT TGGCCCACCG ACCGGCCCCG GTGCAGGTTA GCTGGTTGGG TTATCCCGGT
GGCATGGGGG ATCGACGGCT GGCCGATTAT CTGGTGGGGG ATCCCATCAA CACCCCCGCC
CATGAGGCGC ACTTGCACGC CGAGTGGTTG GCGATTATGC CCCATTGCTA CCAGCCCAAC
CCGCGCACGC TGGCCTGCGA TCCAACCCCC AGCCGTCAAG AGGCCGGTCT GCCCCCCCAA
GGGGTGGTAT TTGGCAGCTT TAACCAGAGC TACAAAATCA CCCCCCAGAT TGTGGCGCTG
TGGAGTCGGC TGCTGCATGC CGTTGAACAT GGTGTTTTGT GGCTGTTGGA TCCCGATCTG
CCGGCGGCGG TGGAACATTT ACAGGCCCAT TTTGCAGCCC ATGGCATTGC CAAACAGCGG
GTGATTTTTG CGCCGCGTCT CTCCATGGCA GCACACATGG GCCGCTTGCC CTTGGTGGAT
GTGGCCTTGG ATACCTTTCC CTACACCTCC CACACCACCG CCAGTGATGC CCTCTGGAGC
GGGGTACCGC TGGTGGCTTG GCGGGGAGAA ACCTTTGCCT CTCGCGTTTC GACCTGCCTT
GCCATTAACA TGGGCATGCA AGAGCTGGTG GTGGAGGATG GCGAACACTA CTTGGCGCTG
GCTCAAGCAT TGGCCCACGA CCCTCAGCGC CGCGCCGCGC TGCGTGACCG TTTACGACAA
ACCAGAGAAC ATGCCCCTCT CTACGATGCC CCCCTCTTTA CCACCCATTT AGAGCATCTC
TACCAGCAGA TGTGGCGTAA CCATAGCCAT GGCCAACATC GCCTCATTGA CGGCTCGGGA
GCAACCCTTG ATCAACCCAT CGCGCGCCCA TAA
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| Protein sequence | MTMPQHDPLG TALSQAMQQG RFAQALQQAN RQLKKPGPHP YALWQLAAQA AEKLHDIPQA
ERLWRMAITA PDQQGQALVG LGELLEEAQR LPEAHTAFRT ALGFNPHLGS AHHGLGRLLE
GAGELQAALQ CYQQAVTLEG GLNSARFRLG RLWQRLGEPQ QAKQAFAEIL SQHPHFYLAR
LHLAECQQRL GEAQQAEQNY LLVIQQQASL PEAHNQLANL YTDQRHFAQA IHHYQAAIEL
RPSVAMFHYN LGYVYLLQND HATAAQHYSN AYRLDPQLGG ALGSMILCDM MLCRWDRLEA
HIAGVKALLG GERAQHAPPL VPFITTYLPQ IGAALQRQAG AQFTQLSFGA IMAQPPLAAA
HRPRATGSPL RIGYLSADFR NHAISRLAIG VLEGHDRRQF TLTAFAIGPD TDDAMRQRVK
QAVHHFHLIG HLDDAAAARF IAAQEIDILV DMMGYTTHAR PGILAHRPAP VQVSWLGYPG
GMGDRRLADY LVGDPINTPA HEAHLHAEWL AIMPHCYQPN PRTLACDPTP SRQEAGLPPQ
GVVFGSFNQS YKITPQIVAL WSRLLHAVEH GVLWLLDPDL PAAVEHLQAH FAAHGIAKQR
VIFAPRLSMA AHMGRLPLVD VALDTFPYTS HTTASDALWS GVPLVAWRGE TFASRVSTCL
AINMGMQELV VEDGEHYLAL AQALAHDPQR RAALRDRLRQ TREHAPLYDA PLFTTHLEHL
YQQMWRNHSH GQHRLIDGSG ATLDQPIARP
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