| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_3286 |
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| Symbol | |
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| ID | 4482256 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 4101423 |
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| End bp | 4102067 |
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| Gene Length | 645 bp |
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| Protein Length | 214 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639724037 |
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| Product | thiamine-phosphate pyrophosphorylase |
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| Protein accession | YP_867182 |
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| Protein GI | 117926565 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0352] Thiamine monophosphate synthase |
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| TIGRFAM ID | [TIGR00693] thiamine-phosphate pyrophosphorylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.000497087 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTTTC CTACCCATAC GCTCTACCCC ATATTGGATC AAGCGTGGCT GGATCAGTCG
GGATTTCATA TTTCGGCGGA AGCGGTCGCA CAGCAGTTTA ATACCCTACA GCTACCGCTT
ATTCAGCTGC GTAGTAAGGG AGAAGCGGGG GCACAGTGGG CATTTATGCA GCCCTGGGCC
GCTGCTTTTC GCCGCCACGC GCCCAATTGC CGTCTTATCA TCAACGACCG GGTGGATATT
GCCCTGGCAT TGGCCGCCGA TGGGGTGCAT GTTGGACAAG AGGATCTTCC GGTTGCCGTT
TGTCGCCAAA TCCTCGGCAA CCAAGCTTGG GTTGGCCTAT CCACCCACAA CGCCGAAGAG
ATTGCTCTCG CCCGTCAGAG TGGATGTGAC TATATTGGTT TTGGCCCGGT CCACACCACC
GACACCAAGC AGAACACTTA TCGCGTACAG GGCTACGCAC GCCTGGCCGA GGCGTGTCAT
CTGGCTGCTC ACTTACCGGT TATTGCCATT GGTGGCATTG GCAAAGATCG CATTACCCCT
TGCATGCAGG CAGGGGCCGC CGGTGTCGCG ATGATCAGCG CCCTTTGGCG TCAAGAGGAT
TGGATCGAGC GCCTAACCGA TGCCCAGCAC CGCGTGCATA AATGA
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| Protein sequence | MSFPTHTLYP ILDQAWLDQS GFHISAEAVA QQFNTLQLPL IQLRSKGEAG AQWAFMQPWA
AAFRRHAPNC RLIINDRVDI ALALAADGVH VGQEDLPVAV CRQILGNQAW VGLSTHNAEE
IALARQSGCD YIGFGPVHTT DTKQNTYRVQ GYARLAEACH LAAHLPVIAI GGIGKDRITP
CMQAGAAGVA MISALWRQED WIERLTDAQH RVHK
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