Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_3284 |
Symbol | |
ID | 4482254 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | + |
Start bp | 4099933 |
End bp | 4100925 |
Gene Length | 993 bp |
Protein Length | 330 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 639724035 |
Product | ribokinase-like domain-containing protein |
Protein accession | YP_867180 |
Protein GI | 117926563 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0524] Sugar kinases, ribokinase family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00000189129 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTAAGA TTGATGTTTT TGGTATCGGC AACGCCCTGG TCGATCAAGT TTATGCTGTA GAAGAGTCCT TTCTAACCCA GATCGGCGAA GAAAAGGGGC GCATGTCCCT GGTAGATCCG CAGCGCCAAG CCGAACTTAG CCGTGCTTTG GCATCAACCC CAGCCCTGCG GGCGTGTGGT GGTTCAGCCG CCAATAGCTT GATTGCTCTT ACCCAATTGG GGGGGAGCGC CTTTCATGCC TGCCGTGTTG CAGAAGATGA AACCGGCCAC TTTTTTGCCC AGGATCTAAC CGCTAACGGT GTACAGCACC AACTGCACAC GCTGCCCGCT GGCAGCAGCG GCAGTTGTAT GGTTTTTATC ACCCCCGATG CGGAACGCAC CATGTGTACC TTTTTAGGGG CCTCGGCTGA CCTACAGCCC GAGGATGTTC CCGACGCTAT TCTGACAACC GCCCAGTGGT GTTATGTTGA AGGGTATCTG GTTACAGCAC CCAACACCTT GGCCGCAGCC CTAAAAGGGC TGCAACAGGC ACGGGCAAAC GGGGTTAAAA CCGCCCTGAG TTTTTCCGAT GTCAATATGG TAAAATTTTT CCGCGACGGC TTTAGCCAAA TGTTGGGGGA GAGCGGTGTA GACCTGATTT TTTGTAATGC CGAAGAGGCC CTGGCTTTTG CCGAAACCGA CGACATGGCA CAGGCTACCG CCGCACTAAA AAAACAGAGC CGTACTTTTG TGATCACCCT TGGCGCGGAA GGGGCACTGC TGTGGGACGG CCAGCAGGAG ATCCAGGTCG CCGGTCAACC CGCCAAAGCC ATCGACACGA ATGGCGCGGG GGATATGTTT GCGGGTGCCT TTTTTTACGG CATCACCCAA GGCTGGGATT TTACCAAAGC CGCCCAACTG GCCTGTCGCT GTTGCGCCGT GCTGGTGACC CATGCGGGGG CGCGTTTGCC TAAGTCGCGC ACCCAAGAGA TTCTGGCCCA GTTTGTCCCA TAA
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Protein sequence | MAKIDVFGIG NALVDQVYAV EESFLTQIGE EKGRMSLVDP QRQAELSRAL ASTPALRACG GSAANSLIAL TQLGGSAFHA CRVAEDETGH FFAQDLTANG VQHQLHTLPA GSSGSCMVFI TPDAERTMCT FLGASADLQP EDVPDAILTT AQWCYVEGYL VTAPNTLAAA LKGLQQARAN GVKTALSFSD VNMVKFFRDG FSQMLGESGV DLIFCNAEEA LAFAETDDMA QATAALKKQS RTFVITLGAE GALLWDGQQE IQVAGQPAKA IDTNGAGDMF AGAFFYGITQ GWDFTKAAQL ACRCCAVLVT HAGARLPKSR TQEILAQFVP
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