| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_3272 |
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| Symbol | |
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| ID | 4482190 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 4086594 |
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| End bp | 4087772 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639724022 |
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| Product | cysteinyl-tRNA synthetase |
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| Protein accession | YP_867168 |
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| Protein GI | 117926551 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2342] Predicted extracellular endo alpha-1,4 polygalactosaminidase or related polysaccharide hydrolase |
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| TIGRFAM ID | [TIGR01370] possible cysteinyl-tRNA synthetase, Methanococcus type |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGTTGA TGTTGTTTTG CTGGATGGGT GGCCGTATGT GCACAAGGGT TGAGTTGGCG
TTAAGTCTGC TTGGTATCGG CTATCCGAAC AAAAGGTTGG GCGGTTATGG TGCGGCACCG
AGGGGGTTTA GACAGGTTGG CGTGTGGCAG CCGAAGGAGC GATCGTGGCG CGTAACCGGC
ACACCTTGGA TGGTTTTTTT TGCGCTTATA ATGGGGGGGA GCATGGGGGT CGAACCGCTG
CAAGCAGCTC AACGGGACTG GCTCTATCAA CTGCAAGGGG CGGAGCCTGC GGCCATTTGT
AAGACGCGTT TTCCGTTAGT GGTGATGGAC CCGGCTCGCC ACGGGGATGC CAACAGCCGC
TATCACCAAA AAGAGATCGA CCAACTTACC GCCTGCGGAA CCGTGCCGGT GGCTTATCTC
TCTATCGGCG AGGCCGAGGA TTACCGGGGC TATTGGAATC CAGCCTGGGT GACGGAAAAA
GGGGGCAACC AGCGCACCGA ACAGGCACCA GTTTGGTTGG GTAAAACCAA CCCTAACTGG
CCGGGTAACT ATAAGGTGCG CTATTGGCAC CCCGCATGGT GGCAAGATGT GCTTAAACCC
GAGCTGCGGC GAATTGTGCA ACAGGGCTTT CGCGGGGTCT ATTTGGACAT CATTGATGCC
TTTGAATATT GGCCTGACCC AACCTTGCAA GGGCTACCCC AAGGGCATGA AAAAAGGGTG
GCAGACGATC CCGTGGGCAA TGAACGTGAA GCCGCGCAGC GTATGATCGC CTTGGTCAAA
CGTATCGCCC AAACCGCCCG GGAGATGGGG GGGGATGGTT TTTTGATTAT TCCCCAAAAT
GGCGAGGCCA TTATGGATTA TGACTGGGGC GGGGATTATC TGGCGGCCAT CGACGGTATT
GGGGTAGAGA GCCTGTGGTA TGTGCGTACC GCACAACAGG ATGATAAAGC TTGGTTGCAC
AAACGGTTAA AACGGATATG GCGTATTGCA GCGGCACCGG GCAAACGGGT CTTTTCGGTG
GATTATGTGG ATAATGGCCA CCCTGAGGAT GCCGCGAATC TGGCACGTAT CCGGGAGTAT
CAGCGACGCT GTTTTAAAGA GGGTTTTCAC TGTTACGCGG CCCGTGATAA TCAAGCGCTG
GATGTCATGA ACATCATACC CGGTTATCAG CCAAAATAG
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| Protein sequence | MGLMLFCWMG GRMCTRVELA LSLLGIGYPN KRLGGYGAAP RGFRQVGVWQ PKERSWRVTG
TPWMVFFALI MGGSMGVEPL QAAQRDWLYQ LQGAEPAAIC KTRFPLVVMD PARHGDANSR
YHQKEIDQLT ACGTVPVAYL SIGEAEDYRG YWNPAWVTEK GGNQRTEQAP VWLGKTNPNW
PGNYKVRYWH PAWWQDVLKP ELRRIVQQGF RGVYLDIIDA FEYWPDPTLQ GLPQGHEKRV
ADDPVGNERE AAQRMIALVK RIAQTAREMG GDGFLIIPQN GEAIMDYDWG GDYLAAIDGI
GVESLWYVRT AQQDDKAWLH KRLKRIWRIA AAPGKRVFSV DYVDNGHPED AANLARIREY
QRRCFKEGFH CYAARDNQAL DVMNIIPGYQ PK
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