| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_3248 |
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| Symbol | |
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| ID | 4481229 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 4042832 |
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| End bp | 4043959 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639723998 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_867144 |
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| Protein GI | 117926527 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000122145 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000539204 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTTGTCC CGCCCCTACT GTCTGCTGCA CCGATGCATG CAAGCCAGTA TAAGACAGAG
CAGGTCGGTA TGGCACAAAG TGGAGCTCAC ACCATGCTTG GTGGCACGGT TGTCCCGCTC
AAGGAGGTAT CCTTCTCAGC GCAGATGCCT GGCCGTGTGG AGTTTATCGC GGGCGTGGAG
GGAGCAACGT TTGAAGAGGG GGTCGTACTC GTCGCACTGG ACGAAGATGA TCTGCTGGCC
AAGCGGCGCG CAGCTTACGC TCAATATATG AAGGCCCAGG CGGCTTTCCG CAACTCCCGC
GTGCAGTATA CCCGAGAGGT CTACTCTGGG TCGCACATGG AGTCGGAAAA TACCGGCATG
GCCATACCTA AGATGTTTGA CCGGTACATG ACCCGTCCCT TTTCGGACAT GGTTGGCGCG
GACAACTCCG AGGTAACGCG GCGCGCCCAG ATTTGGGATT CTGGCACCCG CATTGACCAA
GCCCGGGCGC AGATGATGCA AACCCAGGCC GCTCTGCAAG AGTTGGATGC CAAACTGCGG
GATACCCGTA CCATTGCCCC CTTTCACGGT ACCATCGTGC AAAAACATGT GGAGGTTGGG
GATACGGTAC AGCCTGGCAT GCCACTGCTC CAGTTTGCCA ACATTCACCA CCTGCAAATC
AAGGTGGAGG TACCGGCCCG TTTGATGCCC GGCATCAAAA AGGGGATGAG CATCCCGGCG
CGTCTGGATG TGGGGGGAAC CCTTATTGAG ACACGTGTTG CCCAGGTCTT CCCCATGGCT
GACCCTCAGC GCCACACGGT GACGGTTAAG TTGGATCTGC CCAGCAATGT TCCTGGCGGT
CCGGGTATGT ATGCTGAGGT GATGATTCCC GATGTAACCA GCCCTGGTGA CCAAGTACCG
GCGATTCCTG CCAGTGCGAT TATCTGGCGC GGCAGTCTGC CTTCGGTCTA CGTGGTCAGT
AATGGCAAAA TGGAGCTACG CATGATCCGC CGGGGTGGCG ATACCCTGGA GGGCGGCAAG
GTCAAGGTGC TCTCTGGTTT GCAAGTGGGT GAGACCATTG TGATCAACCC CCCCAATGGG
CTGGCGGGTA GCTGGGATGC CGGTTCAGGC GAACAAAAAG CGCCCTAA
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| Protein sequence | MLVPPLLSAA PMHASQYKTE QVGMAQSGAH TMLGGTVVPL KEVSFSAQMP GRVEFIAGVE
GATFEEGVVL VALDEDDLLA KRRAAYAQYM KAQAAFRNSR VQYTREVYSG SHMESENTGM
AIPKMFDRYM TRPFSDMVGA DNSEVTRRAQ IWDSGTRIDQ ARAQMMQTQA ALQELDAKLR
DTRTIAPFHG TIVQKHVEVG DTVQPGMPLL QFANIHHLQI KVEVPARLMP GIKKGMSIPA
RLDVGGTLIE TRVAQVFPMA DPQRHTVTVK LDLPSNVPGG PGMYAEVMIP DVTSPGDQVP
AIPASAIIWR GSLPSVYVVS NGKMELRMIR RGGDTLEGGK VKVLSGLQVG ETIVINPPNG
LAGSWDAGSG EQKAP
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