Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_3235 |
Symbol | |
ID | 4483737 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | + |
Start bp | 4027806 |
End bp | 4028330 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 639723985 |
Product | hemerythrin-like metal-binding protein |
Protein accession | YP_867131 |
Protein GI | 117926514 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2703] Hemerythrin |
TIGRFAM ID | [TIGR02481] hemerythrin-like metal-binding domain |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.6093 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.294048 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCTCAAC CAACCGGTCT TGTCCGTACA GGTATTGGTC CCATTGATCG CGACCATTTG CATCTATGGG ATCTTTTTCA AACCTTGCTT GAAAAAGATC TGCGGGAGGA TGAAGCGCTT GCGGTGTTAA AAGAGTTGCT GGCGTACACC CGCTACCATT TTGGACGCGA AGAGCGCCTC ATGCAGGAAA TTGGCTTAAC CGGCGAACCC CGCCAGGCCC ATATCCACGA GCATGCTATC TTTGTCAAAC GGGTAGAGAA TTTTTTAGAG CTTCTGCAAA ACCGAGCAGC TCCCAAAACC ACGGGATTGC AGGCGATGGT GGAGGAGATC CAAAAAATGC ACCAGTTACC AACCCTACCG CAACTTGACC CTGCCAAACG GGTGGTGGCC TTTTTAGTGG ATTGGATTCT CAACCATACC AGCGGCATGG ATGTTGAGTT GGCAAACCAT ACCGAGGCCG CCAAGGGTCC CTTAGCAAAC CAAGATTTCA GCTTTTTAGA GTCGGATCGT CCGGCTGCTT CGTGA
|
Protein sequence | MSQPTGLVRT GIGPIDRDHL HLWDLFQTLL EKDLREDEAL AVLKELLAYT RYHFGREERL MQEIGLTGEP RQAHIHEHAI FVKRVENFLE LLQNRAAPKT TGLQAMVEEI QKMHQLPTLP QLDPAKRVVA FLVDWILNHT SGMDVELANH TEAAKGPLAN QDFSFLESDR PAAS
|
| |