Gene Mmc1_3235 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_3235 
Symbol 
ID4483737 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp4027806 
End bp4028330 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content51% 
IMG OID639723985 
Producthemerythrin-like metal-binding protein 
Protein accessionYP_867131 
Protein GI117926514 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2703] Hemerythrin 
TIGRFAM ID[TIGR02481] hemerythrin-like metal-binding domain 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.6093 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.294048 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCAAC CAACCGGTCT TGTCCGTACA GGTATTGGTC CCATTGATCG CGACCATTTG 
CATCTATGGG ATCTTTTTCA AACCTTGCTT GAAAAAGATC TGCGGGAGGA TGAAGCGCTT
GCGGTGTTAA AAGAGTTGCT GGCGTACACC CGCTACCATT TTGGACGCGA AGAGCGCCTC
ATGCAGGAAA TTGGCTTAAC CGGCGAACCC CGCCAGGCCC ATATCCACGA GCATGCTATC
TTTGTCAAAC GGGTAGAGAA TTTTTTAGAG CTTCTGCAAA ACCGAGCAGC TCCCAAAACC
ACGGGATTGC AGGCGATGGT GGAGGAGATC CAAAAAATGC ACCAGTTACC AACCCTACCG
CAACTTGACC CTGCCAAACG GGTGGTGGCC TTTTTAGTGG ATTGGATTCT CAACCATACC
AGCGGCATGG ATGTTGAGTT GGCAAACCAT ACCGAGGCCG CCAAGGGTCC CTTAGCAAAC
CAAGATTTCA GCTTTTTAGA GTCGGATCGT CCGGCTGCTT CGTGA
 
Protein sequence
MSQPTGLVRT GIGPIDRDHL HLWDLFQTLL EKDLREDEAL AVLKELLAYT RYHFGREERL 
MQEIGLTGEP RQAHIHEHAI FVKRVENFLE LLQNRAAPKT TGLQAMVEEI QKMHQLPTLP
QLDPAKRVVA FLVDWILNHT SGMDVELANH TEAAKGPLAN QDFSFLESDR PAAS