| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_3187 |
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| Symbol | |
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| ID | 4482944 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 3966908 |
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| End bp | 3968227 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639723936 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_867083 |
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| Protein GI | 117926466 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.230309 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCACC AAAAACCCAG CGTTTGGCGC AAACTCCGTG TGATCCCGCC TATTCTTATT
GGGATTGTGC TCTTGGTCTG GATGGTCAAA GGCCGCCAGC CCCCCCAACA GCGCGCCAAA
GCGGAGCCGG TACAGAGCGT GCGCGTGGTA ACCGTGGCCC GCGTCACTCT AATCCCCACC
GCCCAGGGTT ATGGTGCTGC CCGTCCGGCG CGGGTCTGGC GGGCCATACC CCAGGTCTCC
GGGCGCATCG TCGCCCTGCA TGAACGCCTG CACAATGGCG AGATTTTGGC CCAGGGCACC
GAACTGGTGC GCATTGACCC GGTGGATTAT GAGCTCGCCT TGGCACAGGC ACAGGCTGAA
TTGGCTGAGT TACAGGTGCA GGAGAGCAAC ACCCGCGCCT CCCTACAGAT TGAGCAGCGC
ACCCTGAAGC TGGCCGAGCA GGAGATGGCC CGCAAACAGA CGCTGTTAAA TCAAAAAACC
ATCTCCCAAA CCAGCCTAGA CGAGGCCGAG CGGGCCACCC TGACGGTGCG GGGCTCGGTG
CAAAACTTGT TAAATACGCT GGACCTTATC CCCACCCAGC GCAAACTTTT GCAAACCAAG
GCCGAGCTGG CCCAGCGCAA TCTACAGCAC ACCATCATTC GTGCCCCCTT TACCCTGCGC
GTTGCCGAAT TGGCGGTGGA ACAAGATCAA ATCATCACCA CCGGACAGAC GCTGTTTGCC
GGTGACGGGG TGGAACAGGT GGAGATTGAG GCCCAGGTCG CCCTGTCTAA TCTGCGTCGC
CTGTTTATTG GCCGCGATGA TATTCAAGGC AGCCTTATCC CAGGCGGCAA ACTTGACCTA
CCAACCCTGG CCGAGCTCAA ACCCGTGGTT CGCTTAGATT TGGGCAATAC CACGGCCCAG
TGGCAGGCCC GCTTTGTGCG CTTTAGTGAT GGAGTCGACC CAAAAACCCG CACCATGGGC
ATGGTGGTTG CCGTCGACAA CCCCTATCAA AAGGTCATCC CTGGTCACCG CCCACCACTC
TCTAAAGGCA TGTTTTTACA CGTTTCTGTA GAGGGAAAAC CGCAGCCAAA TCGGGTTGTC
TTGCCCCGCT CGGCGCTACG TGGTGAGGTG GTCTATTTGG TGACAGCCGA CAATCGTCTA
CAGCTCCAGC CCGTACAGGT ACTGTTTCAA CAGGGCAACC TCACCGTCAT TGCGCAGGGC
CTGCAAGGCG GTGAGCGGGT GGTGGTTTCG GATCTGATAC CAGCGGTAGC GGGCATGGCC
CTTAACCCGG TGATGGATGA GGCGCTCTCC AAACAGCTAC TGGGTGGGGG TGCGCCATGA
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| Protein sequence | MTHQKPSVWR KLRVIPPILI GIVLLVWMVK GRQPPQQRAK AEPVQSVRVV TVARVTLIPT
AQGYGAARPA RVWRAIPQVS GRIVALHERL HNGEILAQGT ELVRIDPVDY ELALAQAQAE
LAELQVQESN TRASLQIEQR TLKLAEQEMA RKQTLLNQKT ISQTSLDEAE RATLTVRGSV
QNLLNTLDLI PTQRKLLQTK AELAQRNLQH TIIRAPFTLR VAELAVEQDQ IITTGQTLFA
GDGVEQVEIE AQVALSNLRR LFIGRDDIQG SLIPGGKLDL PTLAELKPVV RLDLGNTTAQ
WQARFVRFSD GVDPKTRTMG MVVAVDNPYQ KVIPGHRPPL SKGMFLHVSV EGKPQPNRVV
LPRSALRGEV VYLVTADNRL QLQPVQVLFQ QGNLTVIAQG LQGGERVVVS DLIPAVAGMA
LNPVMDEALS KQLLGGGAP
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