| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_3175 |
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| Symbol | |
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| ID | 4483223 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 3955842 |
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| End bp | 3956549 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639723924 |
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| Product | phage shock protein A, PspA |
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| Protein accession | YP_867071 |
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| Protein GI | 117926454 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG1842] Phage shock protein A (IM30), suppresses sigma54-dependent transcription |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.406635 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0527419 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGGAC TGTTTCAACG CCTCTTTACC TGGGGTAAGT CCGAGGCGCA CTCGGCGATG
GATAAATTGG AAGATCCGGC CAAAATGGCC GAGCAGGGTA TCCGCGATCT CCAAGCCGAG
CATGCTAAAA ATATGGATGC CTTAGCCAAA GTGAAAGCGC AGGTTATTCG CCTGCGGCGG
GAGATGCTCA CCTTGCAGGA GACGGCCTCC AACTATGAGC GCAAGGCGAT GCTGCTGGTG
CAAAAGGGCC AGCAAGGCGC GCTGGATGGG GCCGAGGCGG ATCGTCTGGC CAGTGAGGCG
CTAAGCCGCT ATGAGGATGC CCAAACGCAG GCCAACCGTC TGAAGGCGGA TCTGGAGAAT
ATGGAGAAGA TGGCGGCCCA GTTAGAGCGC AATGTGCAGC AGATTAAAAG CCAGATCGGT
AAGTGGGAAA ATGAGCTGCG TACCCTCAAG GCGCGTGCCC AAGTGAGCAG CGCCACCCGC
AAGCTTAATG CGCAACTGGC CAGTGTGGAT GGCAAAGGTA CCATCGCCAT GTTAGAGCGC
ATGCGTGATA AGGTGCAGGA GCAAGAGTCG CTGGCCGAGG CCTATGGTGA GATGGCGGCG
GTGCCTAAAA CGGTAGATGA TGAGATTGAT AAGGCACTCA TGGGTGGTGG TGGAACACAA
ACCGATGCTT TGGCCGCGCT CAAGGCGCGC ATGGCGGCTA AGGATTAA
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| Protein sequence | MSGLFQRLFT WGKSEAHSAM DKLEDPAKMA EQGIRDLQAE HAKNMDALAK VKAQVIRLRR
EMLTLQETAS NYERKAMLLV QKGQQGALDG AEADRLASEA LSRYEDAQTQ ANRLKADLEN
MEKMAAQLER NVQQIKSQIG KWENELRTLK ARAQVSSATR KLNAQLASVD GKGTIAMLER
MRDKVQEQES LAEAYGEMAA VPKTVDDEID KALMGGGGTQ TDALAALKAR MAAKD
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