| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_3087 |
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| Symbol | |
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| ID | 4483169 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 3856529 |
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| End bp | 3857377 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639723835 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_866984 |
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| Protein GI | 117926367 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.964725 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGACATTG ATCAATTAAG GACCTTTTTA GAGGTCAATC GTACACGCCA CTTTGGGCGG
GCCTCGCAAA ATCTGTTTGT GACTCAGTCG GCCATCAGCT CACGCATTAA GCAGCTTGAG
GAGGAGCTCT CCATCAAGCT GTTTACCCGT GCCCGCAACG ATATTCAGCT CACGGTTGCG
GGCAAGCGTT TTCTTAAAAC CGCTGAGATG ATTGTCAGCA TGTGGGAACA GGCCCGCCAT
AGCATTCAGC TTTCTAATGA AGACAAGCCC ATGTTGGTGG TGGGGGGCAT ACCCAGTTTG
TGGGAGATTA TTCTCAAGGA TTGGGTGTTG GACATACACC AGAGCCACCC CGAGCTTATT
TTAAGCTGTG ACAGCGAACC GGCCCAAAGC ATTATTCAAC GGGTATTGGG TAAAACACTG
GATTTGGGCT TTGTCTACAC CTCACAAAAG CTGGTGGAGT TGGAACAGAT TGAGATCACC
CCCTTGCAGC TGATTATGGT GAGTGACCGC CCTGAGCTAA CCCCGCAGCA GGCGATTAAA
TACCGCTACC ATTTTGTGGA TTGGGGGCAA TCCTTTGGGG TCGCCCATGC CCGTTGGTTT
CCTGAGCTAC CGCACCCTTT TCTGCGGCTT GGCTGGGGGG GCATGGCCTT GGAGTCTTTG
GTCAAATATG GGGGGGTTGC CTACCTGCCC GATCTTATGG TGCGGGAATT TTTACAGCGA
GGGGCACTCT TTCCCGTTCA AGAGGCCCCT ACTTTTAGCC GTCAGGTCTA CGCCATCTTT
CGCGAAGAGC ACCCGTTAAA GGGGTTCATT TTGCAACTCT TAGAGAAGCT CCAACCCGGC
CATGCGTAG
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| Protein sequence | MDIDQLRTFL EVNRTRHFGR ASQNLFVTQS AISSRIKQLE EELSIKLFTR ARNDIQLTVA
GKRFLKTAEM IVSMWEQARH SIQLSNEDKP MLVVGGIPSL WEIILKDWVL DIHQSHPELI
LSCDSEPAQS IIQRVLGKTL DLGFVYTSQK LVELEQIEIT PLQLIMVSDR PELTPQQAIK
YRYHFVDWGQ SFGVAHARWF PELPHPFLRL GWGGMALESL VKYGGVAYLP DLMVREFLQR
GALFPVQEAP TFSRQVYAIF REEHPLKGFI LQLLEKLQPG HA
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