Gene Mmc1_3080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_3080 
Symbol 
ID4483162 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp3850795 
End bp3851130 
Gene Length336 bp 
Protein Length111 aa 
Translation table11 
GC content56% 
IMG OID639723828 
ProductMu-like prophage I protein-like 
Protein accessionYP_866977 
Protein GI117926360 
COG category[R] General function prediction only 
COG ID[COG4388] Mu-like prophage I protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000583499 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.127378 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGCAGT CCCAGGGTGA TGCTGTGTTG GTTGACTACG AGCACCAATC GATGCATGCC 
GAGTATAATG GGCAACCGGC CCCGGCAGCG GGCTGGATTG AGACGCTGGA ATATGTGGCG
GGGCAAGGTC TGTATGCCAC GGTGCGCTGG ACTGAGCGCG CTAAGGAGAT GATCCGGGCT
GGTGAGTACC GCTACATAAG CCCGGCGTTT AACTATGACA ACCGTACCGG TGCCGTCAGC
AGTCTGATCA GCGCCGCACT GACCAATCAA CGGGTGGTAA AAATTTTGTG CGAGGGCTCT
ATTTTTCGCT TGTTTTTTCC ACCAATCGGC CTATAG
 
Protein sequence
MVQSQGDAVL VDYEHQSMHA EYNGQPAPAA GWIETLEYVA GQGLYATVRW TERAKEMIRA 
GEYRYISPAF NYDNRTGAVS SLISAALTNQ RVVKILCEGS IFRLFFPPIG L