| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_3077 |
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| Symbol | |
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| ID | 4483159 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 3848545 |
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| End bp | 3849438 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639723825 |
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| Product | RNA polymerase, sigma 32 subunit, RpoH |
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| Protein accession | YP_866974 |
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| Protein GI | 117926357 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02392] alternative sigma factor RpoH
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000000192537 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0402909 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACGACCC AGTCTGTTGC CATTTCCCGT CCTGCGGAGC TTGCCCTCGG TCAAGGGGAA
GAGGGTTTTC AGCGTTTTTT AAAACAAGCC GCACAAGCCC CCATGCTCAG TGCGGATGAG
GAGTACCAGC TGGCGACCAA CTACCGTCGT CATAACGATC TGGAGGCGGC CCACCGATTG
GTGCATGCCC ATCTGCGTTT GGTGCTCAAG ATAGCCCGTG AGTATCTTTA TTATCGCAGT
TCTCTGCCCG ATTTGGTGCA GGAGGGTAGT ATTGGGCTGA TGCATGCGGT GAAAAAATTT
GATGCGCAGC GTGGTAATCG CTTGGCGACC TATGCCGTTT GGTGGATCCG GGCGGCGATC
CATGACTTTA TCTTAAACAC CGCACACATG GTCAAAGTGG CGACAACCAA GCTCAAGCGG
CATCTGTTTT TTAAATTGCG CCAAGCCAAA AGCTCGCTGG CCCCCCTCAA TCAGCAGGAG
GCCGAAGAGC TGGCGGTCAA GTTTGCGACC GATGCCCAGA CCATTTTGGA GATGGATAGC
CGGTTGGCCG GTGCCGATAG CTCCCTCAAT CAGCCGCTGT TTGATGAGGG GGGAGAGCTC
ATCGAGCTGC TAGAGGATGA GCGTCCCAAT CAAGAGCTGC AACTCCAGAG CGCGCAGCAA
CAGCAGCGGC TTGGCAGGTT GGTTAAACAG GGGTTAAAAC AGCTTAATGA GCGGGAACAG
GCGATCATTA TCTCACGTTT TATGGGGGAG CATGCCGAGC CCCGCGAGCA GTTGGCGCAG
CGTTTTCAAA TTAGTGGGGA GCGGGTCCGG CAGATCGAGC AGCGGGCTAT GGCAAAACTG
CGCAGCTATT TCCAAAGCCA GCCAGATGCC CAAGAGCTGG CGATGCTGAT TTAA
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| Protein sequence | MTTQSVAISR PAELALGQGE EGFQRFLKQA AQAPMLSADE EYQLATNYRR HNDLEAAHRL
VHAHLRLVLK IAREYLYYRS SLPDLVQEGS IGLMHAVKKF DAQRGNRLAT YAVWWIRAAI
HDFILNTAHM VKVATTKLKR HLFFKLRQAK SSLAPLNQQE AEELAVKFAT DAQTILEMDS
RLAGADSSLN QPLFDEGGEL IELLEDERPN QELQLQSAQQ QQRLGRLVKQ GLKQLNEREQ
AIIISRFMGE HAEPREQLAQ RFQISGERVR QIEQRAMAKL RSYFQSQPDA QELAMLI
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