Gene Mmc1_3008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_3008 
Symbol 
ID4483239 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp3762171 
End bp3762620 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content56% 
IMG OID639723755 
ProductNUDIX hydrolase 
Protein accessionYP_866905 
Protein GI117926288 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGGAA ATGCTTGGAT CATTCGCCCT TGTGGGCTGT TGCAGCGGGA TGGCGCAATG 
TTGTGGATGC GTTATCACTA CAATGGGCAG GAGCGCTACA ACCTGCCAGG GGGGAACCTA
GAGGCGGGTG AAGAGATGGG CCGTGGACTG GCACGAGAGT TTGATGAGGA GATGGGGCTT
AAAGTAACGG TCGGTGCCCT GTTGGGCTCT ATACAGACCC AAGCTGCGGG GCGGGATGTG
CTGCACCTGC TCTTTGCGGT TACGGCCAAT GGGGAACCCC GGCTTAATCC TGCCGAAACC
AAAGCGCTTG AACTGGTTTG GTTAAATCTT GAGGAAGCCA CTGCATATCC TCTTTACCCC
ATTATTCCAG CTGCAACGTT AGCCCGGCTG TTTCAGGGGC AGGGGATCGA GGGTGGGCAT
CTGGGCCTGT TGCAGCAACC CTGGTTTTAG
 
Protein sequence
MNGNAWIIRP CGLLQRDGAM LWMRYHYNGQ ERYNLPGGNL EAGEEMGRGL AREFDEEMGL 
KVTVGALLGS IQTQAAGRDV LHLLFAVTAN GEPRLNPAET KALELVWLNL EEATAYPLYP
IIPAATLARL FQGQGIEGGH LGLLQQPWF