| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_3001 |
|---|
| Symbol | |
|---|
| ID | 4483232 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | - |
|---|
| Start bp | 3754868 |
|---|
| End bp | 3755542 |
|---|
| Gene Length | 675 bp |
|---|
| Protein Length | 224 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 639723748 |
|---|
| Product | toluene tolerance family protein |
|---|
| Protein accession | YP_866898 |
|---|
| Protein GI | 117926281 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG2854] ABC-type transport system involved in resistance to organic solvents, auxiliary component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATACAGC ATCGTACCTT GGCCATACTC TATTTTTTGG TGGCACTGCT ACTGCCCCTG
TCAAGTCAGG CAGAACCCCC CACCGACCCT CCCGCAACCG ATGCCATTCA GCGCTCGATA
AAACTGGCGC TGGAGTTGTT GCGCGATCCT GCCATGGCCA AACCCGATAT GCTGGAAAGC
CGACGCGATA AATTGCGCGC GCTTATCTAT GGACATTTTG ATTTTGCCAT GATGTCTCGG
GGGGCCATCG GTAGCTATTG GTCCAATTTT ACCCAAAAAC AGAAAGAGAG CTTCATTGAT
CTGTTTCGGC AGACCCTCGA AGATGCTTAC CTGGATAAAG TGGAATCCTA TCGCGGTAAA
GGGGCCGAAT TTGCCCCAGA ACAGCGCAAA TCGGCCCGGA TTATCATCCT GGATAGTCAT
GTGGATCTCG GCGGAACCCC TATTAAGTTA ACCTATCTCT GCTTGGAAAC CCCACAGGGT
TGGAAAGTGG TGGATCTGGT TTTGGAGGGG GTAAGTATTA TCGCTAACTA TCGAAAACAG
TTCCAATATC TTCTGCAACA ACACGAAGTT GAGGAGATGT TGGAGATGCT CCGTAAAAAA
ATTGAATCCA ACCGACAAGC CCGCATGCAT GTCATTGATG AGGCAAAAGC GGCTGAAAAA
GCGTCCAACT TGTAG
|
|---|
| Protein sequence | MIQHRTLAIL YFLVALLLPL SSQAEPPTDP PATDAIQRSI KLALELLRDP AMAKPDMLES
RRDKLRALIY GHFDFAMMSR GAIGSYWSNF TQKQKESFID LFRQTLEDAY LDKVESYRGK
GAEFAPEQRK SARIIILDSH VDLGGTPIKL TYLCLETPQG WKVVDLVLEG VSIIANYRKQ
FQYLLQQHEV EEMLEMLRKK IESNRQARMH VIDEAKAAEK ASNL
|
|---|
| |