| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_2987 |
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| Symbol | |
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| ID | 4482715 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 3717314 |
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| End bp | 3719155 |
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| Gene Length | 1842 bp |
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| Protein Length | 613 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639723734 |
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| Product | ABC transporter related |
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| Protein accession | YP_866884 |
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| Protein GI | 117926267 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGAGT TGTTTCGTCG TCTGCTGCGG CGCCCGATGG TTTTTCTGTA CCTATTGTTT
GCCACCTTTA TGGTAAATAT CATGGCGTTG GGTGTGACCT TTTACGCCAT TAACGTGATG
CAACGCTACA CCAGTTTTGG GGTGGTAGAG ACCCTTTTCA CGCTTATGGT GGGTATAGCC
ATTGTGCTGT TGTTGGAGCA TGTTTTCCAA CGGTTGCAGA TGCGCTTGGC CCGTACCATT
AGCGCCACGC CAGACGCCTT TGTCTCTGAC GCGGCCTTTG ATGCCATTAT CAATGCCGAT
GCGCAACATC TGGATAAATT AGAGACCACC ACCAAACATC AGGCCATGCG CCATATTACC
GATGTGCAAA AAGCCTTTAG CGCCCGCACG ATTATCTCCA TTTTTGATTT GCCCTTCTCC
TTTTTATCCA TTGGGGTGCT CTATGTGCTC GAACCAAGGG CAGGGGTATT TGTTACCATT
ATGGCGGTCA TCACCTTTGT ATTTGGCATT GTCCACCAAT ACCGTGTGCG ACAACCCACC
AAAGAGCTGG ATCAACTGAC CGGCAGCAGC GGTGTGATGA TGGGATGGGC GGTCAGGGCG
CTAGAAGATG TGCGGGCCTT TAACCACCAT CAAAAATTGA TGCAACGTTG GCGCACGCTC
AGGGTGCGCA CACAACAAGC CAGCGAAAAA TATCAGCAGT TGATGGAGTC TGAACAAAAT
TTTTCTCAAA CCGTCAACAT GATAACCATG GTAGGCACCA TTACCATCGC TGCCCAGGGC
ATTCTGGAGG GCACCATGTC CATGGGTATG ATGCTGGGGA TTAACATTTT GGCAACCCGT
GCGTTAAGCC CGGTCATACG CTTTTCAGCA TCGAGCGATG TGTTGGCAAA AGGGCGGCAG
GCTACCTTGG AACTCAACCA GCTGCTTCGT CTCAATCGAG AATCCAAAGT GGGAACCCGC
TTGAACAACT ATAGCGGACG GGTTGCCTTT AAGGATATGG CGTTTGCCTA TCCAGGGGGG
GCTGGGCCGC TGTTTGAGTC GTTGACCCTG GAGTTGGTGG CAGGGGATTC TCTGGTGGTA
ACCGGTAGCA ATGGCGCGGG TAAATCCACC CTAGCCAAAA TGCTGATGGG TATTTACAGC
CCCATTCGTG GGCACCTGCT TATTGATGGT GTAGACCTGC GCCAAATGGA TTTAACTTGG
TGGCGCAGCC ATGTTATGTA TCTGCCCCAA GAACCTCAGT TTGTGGATGA CACGATTGCG
GAAAACCTGC GGGTAAATAA TCCCGATATT GATGATGAGG GGTTGGAACG CATCATTAAT
ATGGTGGAAC TGCGCGAGTT TATTGACCAC TCTGAGGCAG GTTTGCAAAC TCGCATTGTC
AGTCAGGGGC TTCATCTCTC TTTGGGTATT CGGCGGCGTT TGGCCATCGC CCGAGCGCTG
GCCAGCCGTG CCCGGGTCAC GATCTTTGAT GAGCCAACGG AGGGATTGGA TCTAACGGGG
CAGAAGGCCG TCTATCAAAT TCTCTCCCGC TTATCTCAGG AGGGTAGTAC CATGATTCTG
TTTACCAACG ATCCTAATAT TACCCGCGTA CCCAATCTGT TGCTTAATCT GGATGTCAAA
CCCGTGCCGG AGTTGGTGCG TCGGCGTCCC GCCCCTGTTC CAGAGAGCAG CAAGCCGCAT
ACCGAACAGG CAGAGCCCAA AGGGGGCGAA CAGGCAGCCC CAAGCGTGCT TTTAGAAAGC
CCGGCGGTGC CACCGGTCAG TGTAGCCTCT GCAACCATAC CAGCCGAGGG TACGCTCTCT
ACGGTACCGG TTGAAGCGGC CAATAAGGGT GATGCATCAT GA
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| Protein sequence | MQELFRRLLR RPMVFLYLLF ATFMVNIMAL GVTFYAINVM QRYTSFGVVE TLFTLMVGIA
IVLLLEHVFQ RLQMRLARTI SATPDAFVSD AAFDAIINAD AQHLDKLETT TKHQAMRHIT
DVQKAFSART IISIFDLPFS FLSIGVLYVL EPRAGVFVTI MAVITFVFGI VHQYRVRQPT
KELDQLTGSS GVMMGWAVRA LEDVRAFNHH QKLMQRWRTL RVRTQQASEK YQQLMESEQN
FSQTVNMITM VGTITIAAQG ILEGTMSMGM MLGINILATR ALSPVIRFSA SSDVLAKGRQ
ATLELNQLLR LNRESKVGTR LNNYSGRVAF KDMAFAYPGG AGPLFESLTL ELVAGDSLVV
TGSNGAGKST LAKMLMGIYS PIRGHLLIDG VDLRQMDLTW WRSHVMYLPQ EPQFVDDTIA
ENLRVNNPDI DDEGLERIIN MVELREFIDH SEAGLQTRIV SQGLHLSLGI RRRLAIARAL
ASRARVTIFD EPTEGLDLTG QKAVYQILSR LSQEGSTMIL FTNDPNITRV PNLLLNLDVK
PVPELVRRRP APVPESSKPH TEQAEPKGGE QAAPSVLLES PAVPPVSVAS ATIPAEGTLS
TVPVEAANKG DAS
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