| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_2986 |
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| Symbol | |
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| ID | 4482714 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 3715986 |
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| End bp | 3717317 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639723733 |
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| Product | HlyD family type I secretion membrane fusion protein |
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| Protein accession | YP_866883 |
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| Protein GI | 117926266 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01843] type I secretion membrane fusion protein, HlyD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGAAT TAGAAGCAAC GCCCTTCACC GAGGAGGCGT TGGATCCTAA AAACGCGCCC
GGCGGTTCAT TGGGATTGGC GGGTTGGATC TACATTCCCC TCTTTTTTGG TTTTGTTATC
TCGTTGGGTG TATGGGCCTA TTTTGGTGTG TTAGATGTGG TAACGTTTAC CACCGGCGAG
GTGGTGCCCA GTTCACAGAT TAAACATGTG CAGCATCTGG AAGGGGGAAT TTTGCGGGTA
ATCCACGTCA AAGAGGGCGA AGAGGTCAAA TTGGGCCAGC CTTTGATTGA GTTAGAGTCC
ATTGCCGATG AGTCCGACCT AAGTGAACTG ACTGCCCGCA TGGTGGGCTT GCAATTGGAT
ATTATCCGCC ATGATGCGGC GGCAAAATTG GCCGCACACC CTGACTATCC CCCAGAATTG
GTGAGTAAAT ACCCCCAACT GGTTAAACAA TCCAGAGCGT TGTTTGAAGC GCGTGCCTCC
ACCTTGCACG GGGAAAAGGT GGAAATGCTC AATCACTATA AAGAAAATGA GTCGCTGTTA
GGTGAGATCC GCGCCCGTCT GCGCAACAGC CGCGAGCGGA TGAAGTTTTT ACATGAGCAG
GTTAAAATTA GTGAAAATTT GCTTAAAGAT GAGCTGACCA GCCGGTTGGA CCATTTGGCC
TTGTTGCGTC AGGAACGCAA GCTGCAGTCG GATATAGATG AGGATGAGGC GGGCATCACG
GGGCAACAAT CCAAGTTGCG GCAGATTGAA AACGGCATCC AGACCCTGGA AAATCGTTTT
GTGGAGCAGG CTAAAACAGA GGCAGATAAG GCGCGTCAAA CCTTATCAGA GTTAAGCCAT
CGCTTAAGAA AGTTTGATGA TCGTGCGGCG CGTACGATCT TACGGGCACC CGCCAATGGG
GTGGTGAAGG CGATCTTAAA TAATACGGTG GGTGGGGTCG TGGGGGCAGG TGAGACGGTG
ATGGATATTG TGCCTATGGA TGATCGTTTG ATCGTCGAGG GGCACCTGTC GCCGGGAGAT
GTGGGGCATG TGCAGATCGG GCAAAAGGGG TATATTACCC TAGCCAGTCG GGAGGGTGTT
CGTTATGGAC GCCTAAATGC CGAGGTTGTC CACATAAGTC CAGACACCTT TACCAATGAG
CGTAACCAAC AGACCTACTA CAAAGTACGG ATGCAGACCG AGGGCAGCAC CTTTGTACAG
GGTAAATATC GTTATGAACT CTACCCAGGT GTTCAGGTAA CTGCTGCAAT CCGTACCAGT
GAACGCAGGG TGATTGACTA TTTTCTTGAG CCACTTATGC TGGGTCAAAG TCGGGCACTG
CGGGAACGCT AA
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| Protein sequence | MNELEATPFT EEALDPKNAP GGSLGLAGWI YIPLFFGFVI SLGVWAYFGV LDVVTFTTGE
VVPSSQIKHV QHLEGGILRV IHVKEGEEVK LGQPLIELES IADESDLSEL TARMVGLQLD
IIRHDAAAKL AAHPDYPPEL VSKYPQLVKQ SRALFEARAS TLHGEKVEML NHYKENESLL
GEIRARLRNS RERMKFLHEQ VKISENLLKD ELTSRLDHLA LLRQERKLQS DIDEDEAGIT
GQQSKLRQIE NGIQTLENRF VEQAKTEADK ARQTLSELSH RLRKFDDRAA RTILRAPANG
VVKAILNNTV GGVVGAGETV MDIVPMDDRL IVEGHLSPGD VGHVQIGQKG YITLASREGV
RYGRLNAEVV HISPDTFTNE RNQQTYYKVR MQTEGSTFVQ GKYRYELYPG VQVTAAIRTS
ERRVIDYFLE PLMLGQSRAL RER
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