| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_2974 |
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| Symbol | |
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| ID | 4483492 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 3694551 |
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| End bp | 3695399 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 639723721 |
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| Product | hypothetical protein |
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| Protein accession | YP_866871 |
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| Protein GI | 117926254 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2342] Predicted extracellular endo alpha-1,4 polygalactosaminidase or related polysaccharide hydrolase |
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| TIGRFAM ID | [TIGR01370] possible cysteinyl-tRNA synthetase, Methanococcus type |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.261416 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGCCA CCATGCTTGC CATCATGATA CTCTGTGAGG CACTGGTCTT TCTCTCAACA
GCCCATGCTG CGCCCGCTGA GCGGTTTAAC CGTTGGGCGG TCTACTATGC CGACTTAGCT
CCAACCGAGG CCTTCACACC CTATCAACTG GTGGTGTTAG ATAGCAGCTA TCACCCTGCC
CTCGCGCCAC TGGTTGAACG ACGTAAAACC CTGCTTGGCT ACCTTAGCCT GGGTGAGGTA
GGCTCCCATC GTGACTATTT TGCCCAGGTT AAGGCGCAGG GCATTGTGTT GCAGGAAAAT
CAATTTTGGC CTGGCAGTTA TTTTGTCGAT GTGCGCAGCC ATCTATGGGC CAAGCGGGTA
CTGGAAAAGT TAATTCCAGA TATTTTACGC CAGGGGTTTC AGGGCATTTT CATCGACACC
CTCGACAATC CCCCCTATTT GGAACAACAA GACCCAAAAC GCTTTAAGGG CATGACCCAA
GCGGCCATCA ATTTGGTCCA CGCCATTCGT TTGCACTACC CAGACATATT AATCATGGTC
AATCGTGGTT ATGCGATCCT GTCTGATATT CAAACCCAGA TCAACATGGT CCTGGGCGAA
TCGGTTTACA GCCAATATAA TTTTATTGAT AAAAATTACA CTCTTGTGCC ACAAGCCAGC
TATACTGCCC AGGTGCAATT TCTGAAAAAG CTCCAACAAG GTGCGCCCCA TTTACAAATA
TTTACCCTGG ACTATTGGGA CCCCCAAGAC CGTGCAGGAA TTGCCTCCAT CTACACCACC
CAGCGCAACA ATGGTTTTAC ACCCTACGTT GCGACCCATC TTCTGGATCA ATTGGTGGAC
GAGCCATGA
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| Protein sequence | MRATMLAIMI LCEALVFLST AHAAPAERFN RWAVYYADLA PTEAFTPYQL VVLDSSYHPA
LAPLVERRKT LLGYLSLGEV GSHRDYFAQV KAQGIVLQEN QFWPGSYFVD VRSHLWAKRV
LEKLIPDILR QGFQGIFIDT LDNPPYLEQQ DPKRFKGMTQ AAINLVHAIR LHYPDILIMV
NRGYAILSDI QTQINMVLGE SVYSQYNFID KNYTLVPQAS YTAQVQFLKK LQQGAPHLQI
FTLDYWDPQD RAGIASIYTT QRNNGFTPYV ATHLLDQLVD EP
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