| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_2894 |
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| Symbol | |
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| ID | 4480790 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 3591987 |
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| End bp | 3593165 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639723637 |
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| Product | serine peptidase |
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| Protein accession | YP_866791 |
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| Protein GI | 117926174 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.646228 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCGACC GTGCCCGCTT GGAGACTATC CTCTCGGTGA TCGGTCCCCG CATCGGCTTG
GAGCCAACGG CCATGCCCAG CGGCTTTGAG CCCAAGGACC ATAGCTCTGA TTTGATGGTC
ACCCCCAATG GAATCGCCGT CGTGCCTATC CACGGCACCC TGGTAAAACG GGCGGGGGCC
ATTGAGGCGG CATCGGGGCT CATGTCCTAC GCCTCCATTG AAGAGAAGCT GCTGGATGCC
GCTACCGACC CAGCCGTGCG AGCAATCCTG ATGGATATCG ACTCCCCTGG TGGTGAAGTG
GGTGGGGTGT TTGATCTGGC CGCCATGATC AGCGAAGCGG GGCAGGGCAA GCCCATCTGG
GCGCTGGCCG ATGACGCTTT CTCTGCTGCC TATCTTATCG CCTCCCAGGC GCACAGGATC
ATCGTGCCCC AGACAGCTGG GGTGGGCTCC ATCGGCGTCA TAGCTGCTCA TGTGGATGAG
TCGGAGAAGG ATGCCAAAGA GGGGCGCAGC TACACCACCG TGTTTGCTGG AGCCCGTAAA
AATGACTTTT CCACCCACGC CCCGCTGTCG GATGCGGCCC GTTCGAACCT GCAACAGGAG
GTAGACCGTC TCTACGGCAT GTTCACCGGC ATGGTGGCAT CGGGGCGGGG CATGCCAGAG
GCTGTGGTCA GGGCCACAGA GGCCGGACTC TTCTTTGGCG ACAATGCCGT TAAAGCTGGC
TTGGCTGACC AAGTTGGCAC CATCCGCGAT GCTTTGGCGG GGCTCACCGC CCTTATTGAA
TCTCCCAAAC GAACATTCAT GCACAAATTG GAGGCCCCTA TGCCCACCGA TGATACCCCT
GTGTTGGATC AGCCCATGGC TATCACCACC CCACCTGAAC CCCCATCCAA CGTGGTCGAC
CTGGACCAGG TCCGTGCCGA ACACGGCAAA CAGATGCGCG ATGAGGCTCA GGCCATTGTG
GATCTCTGTG CCCTGGCGGG CATGCCCCAC TTGGCAGGTG GTTACATCGC CGAAGGTACC
GCTGCTGAGG CGGTACGCAA AGAGCTACTG GCCAAACGGG CTGAGGCTGA AGAGATCCAT
TCCGAGGTGA TGCCCGGTGA TGGCACCCGT ATGCAGCCCA GCCAGAGTCT TGAAACCAAC
CCGGTGGTGG CCTCCTGCCG CAAACTCGCC GGTCAATAA
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| Protein sequence | MVDRARLETI LSVIGPRIGL EPTAMPSGFE PKDHSSDLMV TPNGIAVVPI HGTLVKRAGA
IEAASGLMSY ASIEEKLLDA ATDPAVRAIL MDIDSPGGEV GGVFDLAAMI SEAGQGKPIW
ALADDAFSAA YLIASQAHRI IVPQTAGVGS IGVIAAHVDE SEKDAKEGRS YTTVFAGARK
NDFSTHAPLS DAARSNLQQE VDRLYGMFTG MVASGRGMPE AVVRATEAGL FFGDNAVKAG
LADQVGTIRD ALAGLTALIE SPKRTFMHKL EAPMPTDDTP VLDQPMAITT PPEPPSNVVD
LDQVRAEHGK QMRDEAQAIV DLCALAGMPH LAGGYIAEGT AAEAVRKELL AKRAEAEEIH
SEVMPGDGTR MQPSQSLETN PVVASCRKLA GQ
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