| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_2861 |
|---|
| Symbol | |
|---|
| ID | 4480809 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | + |
|---|
| Start bp | 3563944 |
|---|
| End bp | 3564405 |
|---|
| Gene Length | 462 bp |
|---|
| Protein Length | 153 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 639723606 |
|---|
| Product | phage integrase family protein |
|---|
| Protein accession | YP_866760 |
|---|
| Protein GI | 117926143 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG4974] Site-specific recombinase XerD |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.328637 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTACGCCT GTGGGCTACG TATCAACGAG GTCCGCCCGC TTGAGGTTTC ATCCATTGAT
GGCCAAAAAC AGCTTCTGCG CATCATCGGT AAAGGGAACA AGGAACGGTT AATCCCTCTA
CCCACCTCTA CTCTGTATGG ATTGCGTTCC CTCTGGAGGG AGCATCGTCA TCCACGATTC
CTGTTCCCCA ACAAAGGAGG GACCAACGCT GTTCACTCCT GCGTTCTGTA CCGGACGTTC
AAGGATGCTT TGCGTGAGGC CGGCCTCCCA TCAGAAATCA CCCCTCACGT CCTGCGTCAC
AGCTACGCTA CACGTTTGAT GGAAAATGAC GTGGATCTGC GTACAACTCA GATCCTTATG
GGGCATTCCA GTATCAAATC CACACTCATC TATTCCCATC TGACTGAACC GACACGTAAG
AAGCTGCGCT CTACCCTTGA TACCATCATG GCCGACCTTT GA
|
|---|
| Protein sequence | MYACGLRINE VRPLEVSSID GQKQLLRIIG KGNKERLIPL PTSTLYGLRS LWREHRHPRF
LFPNKGGTNA VHSCVLYRTF KDALREAGLP SEITPHVLRH SYATRLMEND VDLRTTQILM
GHSSIKSTLI YSHLTEPTRK KLRSTLDTIM ADL
|
|---|
| |