Gene Mmc1_2748 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_2748 
Symbol 
ID4483050 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp3469157 
End bp3471013 
Gene Length1857 bp 
Protein Length618 aa 
Translation table11 
GC content57% 
IMG OID639723493 
Productphage terminase GpA 
Protein accessionYP_866647 
Protein GI117926030 
COG category[R] General function prediction only 
COG ID[COG5525] Bacteriophage tail assembly protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00692747 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCTATCT CAGCGGCAAG GATCTACGAG GATGCATTCC TTCAGGGGTT GATGCCCGAT 
CCGCATCTGA CGGTCTCTGA ATGGGCTGAT GAACACCGCA TGCTCTCTTC GGTGGCCTCG
GGTGAACCGG GGCCATGGCG TACCGATCGC ACCCCCTATC TGCAGGAGGT GATGGACTCT
CTTTCACCCA GCTCACCTAT CGAGCGGGTG GTGGCGATGT TTGGTAGTCA GCTGGGCAAA
ACCGAGTGCG GGTTGAACTG GGTGGGGTAT GTGATTCACC ACGCACCAGG GCCCATGTTG
ATGGTTCAGC CCACGGTGGA GATGGCCAAA CGCTACTCTA AACAGCGGGT GGGACCGCTC
ATCGAATCAA GTTCTGAGAT CCGGGAGCGG GTGAAACCGG CTCGATCCAG GGATTCCGGT
AACACAGTGC TTTCCAAGGA GTTCCCCGGT GGGATCCTGT TGATGACCGG AGCCAACAGC
GCGGTGGGGC TCTCCTCCGC GCCGATTCGG TATCTCTTCA TGGATGAGGT GGACCGTTTT
CCAGGTGACG CTGATGGCGA GGGGGATCCT GTGGCGCTGG CGATTCAGCG CACAGCGAAC
TTCTCTAACC GCAAGGTACT GCTCACCAGC ACACCCACCA TCAAGGGCTT CAGTCGGATT
GAAGCAGCTT ATGCTGAGAG TGACCAGCGC CAGTTCTGGG TACCCTGCCC AGAGTGTGGC
GAATTCCAGG TTCTGACATG GGCCCAGGTG AAATGGCCTC ATGGTGAGCG AAAAGCGGCG
TTTTACCTCT GCCCCCACTG TGAAGCAGAA CTGGCTGATC ATCAAAAGGG CTGGATGCTG
GAAAACGGCG TCTGGCGAGC GGCGGCAGCA GGGGATGGTA AAACAGCAGG CTTTCACCTC
TCCTCCCTCT ACAGCCCTCA TGGTTGGACC TCATGGGGGG ACATTGCGGT GGAGCATGGT
CTGGTGCACA AGGATCCATC TCGATTAAAG ACCTGGGTCA ACACTAAAAT GGGGCAGTGT
TGGGAGGAGC AAGGTGACCG TATCGATGGC GAAGGGCTCA TGGAGCGCCG AGAGGTCTGG
GGCGAACTGC TCCCTGCTGA TGTGGCTGTA CTCACAGCTG GCGTTGATGT TCAGGATGAT
CGTCTTGAAG TTGAAATCGT AGGCTGGGGC CGGGATGAAG AGTCCTGGTC CATTGACTAT
CGGGTATTGT GGGGTGATCC CTCATCCCCA GCTGTATGGG AAGATCTGGA CAACCTGCTC
CGTCACCCCC TTGGTCACAG TCGGCAGTTG CCAGATATGA CCATCCGGGC CGCTGCCATT
GATACCGGTG GTCACCATAC CCTGAAGTCC TATGCCTTCT GCCGATCCAG GCAGGGCCGA
AGGATCTGGG CCATCAAGGG GCGTGGTGGT CAGGGAGTAC CCATCTGGCC CCGCAAGCCC
TCCACCAAGA ATAAGGGCAA AGTACCCCTT TTCATCGTGG GTGTAGATGC CTGCAAAGAG
GCGATCCTCT CCCGTCTACG CATTGAAGAG CCAGGTCCCG GCTATCTGCA CTTTCCCATG
CAACGGGATG GGGACTACTT CAAACAGCTT ACTGCCGAAT CGGTGGTGAC CCGTTATCAC
AAGGGCCGCC CCATTAGGGA GTGGAAGAAG CGGGATTCCG ATCGCAACGA GGCCCTGGAT
TGCCGTGTCT ATGCCATGGC GGCACTACAG GGGCTGATTG CCATGGGGTT TCGGCTCAAC
ATGGCGGTTG AGAAGATCGC TGAACACCCT CTTAAAAATG CGATGCCTGA GCCCGGCAAA
GTGCAGCAAA AGAAGATCAA ACCCAAACGG CGGGTTATTC AATCTGGATG GATGTAA
 
Protein sequence
MAISAARIYE DAFLQGLMPD PHLTVSEWAD EHRMLSSVAS GEPGPWRTDR TPYLQEVMDS 
LSPSSPIERV VAMFGSQLGK TECGLNWVGY VIHHAPGPML MVQPTVEMAK RYSKQRVGPL
IESSSEIRER VKPARSRDSG NTVLSKEFPG GILLMTGANS AVGLSSAPIR YLFMDEVDRF
PGDADGEGDP VALAIQRTAN FSNRKVLLTS TPTIKGFSRI EAAYAESDQR QFWVPCPECG
EFQVLTWAQV KWPHGERKAA FYLCPHCEAE LADHQKGWML ENGVWRAAAA GDGKTAGFHL
SSLYSPHGWT SWGDIAVEHG LVHKDPSRLK TWVNTKMGQC WEEQGDRIDG EGLMERREVW
GELLPADVAV LTAGVDVQDD RLEVEIVGWG RDEESWSIDY RVLWGDPSSP AVWEDLDNLL
RHPLGHSRQL PDMTIRAAAI DTGGHHTLKS YAFCRSRQGR RIWAIKGRGG QGVPIWPRKP
STKNKGKVPL FIVGVDACKE AILSRLRIEE PGPGYLHFPM QRDGDYFKQL TAESVVTRYH
KGRPIREWKK RDSDRNEALD CRVYAMAALQ GLIAMGFRLN MAVEKIAEHP LKNAMPEPGK
VQQKKIKPKR RVIQSGWM