Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_2748 |
Symbol | |
ID | 4483050 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 3469157 |
End bp | 3471013 |
Gene Length | 1857 bp |
Protein Length | 618 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 639723493 |
Product | phage terminase GpA |
Protein accession | YP_866647 |
Protein GI | 117926030 |
COG category | [R] General function prediction only |
COG ID | [COG5525] Bacteriophage tail assembly protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00692747 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCTATCT CAGCGGCAAG GATCTACGAG GATGCATTCC TTCAGGGGTT GATGCCCGAT CCGCATCTGA CGGTCTCTGA ATGGGCTGAT GAACACCGCA TGCTCTCTTC GGTGGCCTCG GGTGAACCGG GGCCATGGCG TACCGATCGC ACCCCCTATC TGCAGGAGGT GATGGACTCT CTTTCACCCA GCTCACCTAT CGAGCGGGTG GTGGCGATGT TTGGTAGTCA GCTGGGCAAA ACCGAGTGCG GGTTGAACTG GGTGGGGTAT GTGATTCACC ACGCACCAGG GCCCATGTTG ATGGTTCAGC CCACGGTGGA GATGGCCAAA CGCTACTCTA AACAGCGGGT GGGACCGCTC ATCGAATCAA GTTCTGAGAT CCGGGAGCGG GTGAAACCGG CTCGATCCAG GGATTCCGGT AACACAGTGC TTTCCAAGGA GTTCCCCGGT GGGATCCTGT TGATGACCGG AGCCAACAGC GCGGTGGGGC TCTCCTCCGC GCCGATTCGG TATCTCTTCA TGGATGAGGT GGACCGTTTT CCAGGTGACG CTGATGGCGA GGGGGATCCT GTGGCGCTGG CGATTCAGCG CACAGCGAAC TTCTCTAACC GCAAGGTACT GCTCACCAGC ACACCCACCA TCAAGGGCTT CAGTCGGATT GAAGCAGCTT ATGCTGAGAG TGACCAGCGC CAGTTCTGGG TACCCTGCCC AGAGTGTGGC GAATTCCAGG TTCTGACATG GGCCCAGGTG AAATGGCCTC ATGGTGAGCG AAAAGCGGCG TTTTACCTCT GCCCCCACTG TGAAGCAGAA CTGGCTGATC ATCAAAAGGG CTGGATGCTG GAAAACGGCG TCTGGCGAGC GGCGGCAGCA GGGGATGGTA AAACAGCAGG CTTTCACCTC TCCTCCCTCT ACAGCCCTCA TGGTTGGACC TCATGGGGGG ACATTGCGGT GGAGCATGGT CTGGTGCACA AGGATCCATC TCGATTAAAG ACCTGGGTCA ACACTAAAAT GGGGCAGTGT TGGGAGGAGC AAGGTGACCG TATCGATGGC GAAGGGCTCA TGGAGCGCCG AGAGGTCTGG GGCGAACTGC TCCCTGCTGA TGTGGCTGTA CTCACAGCTG GCGTTGATGT TCAGGATGAT CGTCTTGAAG TTGAAATCGT AGGCTGGGGC CGGGATGAAG AGTCCTGGTC CATTGACTAT CGGGTATTGT GGGGTGATCC CTCATCCCCA GCTGTATGGG AAGATCTGGA CAACCTGCTC CGTCACCCCC TTGGTCACAG TCGGCAGTTG CCAGATATGA CCATCCGGGC CGCTGCCATT GATACCGGTG GTCACCATAC CCTGAAGTCC TATGCCTTCT GCCGATCCAG GCAGGGCCGA AGGATCTGGG CCATCAAGGG GCGTGGTGGT CAGGGAGTAC CCATCTGGCC CCGCAAGCCC TCCACCAAGA ATAAGGGCAA AGTACCCCTT TTCATCGTGG GTGTAGATGC CTGCAAAGAG GCGATCCTCT CCCGTCTACG CATTGAAGAG CCAGGTCCCG GCTATCTGCA CTTTCCCATG CAACGGGATG GGGACTACTT CAAACAGCTT ACTGCCGAAT CGGTGGTGAC CCGTTATCAC AAGGGCCGCC CCATTAGGGA GTGGAAGAAG CGGGATTCCG ATCGCAACGA GGCCCTGGAT TGCCGTGTCT ATGCCATGGC GGCACTACAG GGGCTGATTG CCATGGGGTT TCGGCTCAAC ATGGCGGTTG AGAAGATCGC TGAACACCCT CTTAAAAATG CGATGCCTGA GCCCGGCAAA GTGCAGCAAA AGAAGATCAA ACCCAAACGG CGGGTTATTC AATCTGGATG GATGTAA
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Protein sequence | MAISAARIYE DAFLQGLMPD PHLTVSEWAD EHRMLSSVAS GEPGPWRTDR TPYLQEVMDS LSPSSPIERV VAMFGSQLGK TECGLNWVGY VIHHAPGPML MVQPTVEMAK RYSKQRVGPL IESSSEIRER VKPARSRDSG NTVLSKEFPG GILLMTGANS AVGLSSAPIR YLFMDEVDRF PGDADGEGDP VALAIQRTAN FSNRKVLLTS TPTIKGFSRI EAAYAESDQR QFWVPCPECG EFQVLTWAQV KWPHGERKAA FYLCPHCEAE LADHQKGWML ENGVWRAAAA GDGKTAGFHL SSLYSPHGWT SWGDIAVEHG LVHKDPSRLK TWVNTKMGQC WEEQGDRIDG EGLMERREVW GELLPADVAV LTAGVDVQDD RLEVEIVGWG RDEESWSIDY RVLWGDPSSP AVWEDLDNLL RHPLGHSRQL PDMTIRAAAI DTGGHHTLKS YAFCRSRQGR RIWAIKGRGG QGVPIWPRKP STKNKGKVPL FIVGVDACKE AILSRLRIEE PGPGYLHFPM QRDGDYFKQL TAESVVTRYH KGRPIREWKK RDSDRNEALD CRVYAMAALQ GLIAMGFRLN MAVEKIAEHP LKNAMPEPGK VQQKKIKPKR RVIQSGWM
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