| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_2745 |
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| Symbol | |
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| ID | 4483047 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 3465799 |
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| End bp | 3467031 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639723490 |
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| Product | serine peptidase |
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| Protein accession | YP_866644 |
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| Protein GI | 117926027 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00202939 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACACAAA ACATGTTGCC CCATCTGGCA TCCCGGATTC TCGGGACGCC GCTTATGGTC
GACCGCGCCC GTTTGGAGAC CATCCTCTCG GTCATTGGTC CCCGCGTCGG CTTGGAGCCA
ACGGCCATGC CCAGCGGCTT TGAGCCCAAA GACCATAGCT CTGATTTGAT GGTCACGCCT
AATGGAATCG CCATCGTGCC CATCCACGGC ACCCTGGTGA AACGGGTGGG GGCCGTCGAG
GCTGCTTCGG GGCTCATGTC CTACGCATCC ATTGAAGAAA AACTGCTGGA TGCCGCCACC
GATCCAGCCG TGCGAGCAAT CCTAATGGAT ATCGACTCCC CTGGTGGTGA GGTTGGGGGC
GTGTTCGATC TGGCGGCCAT GATCCAGGAG GCGGGGCAGG GCAAGCCCAT CTGGGCGCTG
GCCGATGATG CTTTTTCCGC AGCCTATCTC ATCGCCTCCC AGGCTCATCG CATTATTGTG
CCCCAAACTG CGGGGGTGGG CTCCATCGGC GTCATAGCTG CTCATGTGGA TGAGTCGGAG
AAGGATGCCA AAGAGGGGCG CAGCTACACC ACCGTGTTTG CTGGAGCCCA CAAGAATGAC
TTCTCCAGCC ATGCCCCGCT GTCGGATGCA GCTCGCTTCA ACCTGCAACA GGAGGTCGAC
CGCCTCTACG GCATGTTCAC CGGCATGGTG GCATCTGGCC GCAACATCAG TGAGACAGCG
GTTAGGGCCA CTGAGGCAGG GCTCTTCTTT GGCGACAATG CCGTTAAAGC TGGCTTGGCT
GACCATGTCG GCACCATCCG CGATGCCCTA GCGGGGCTCA CCACCCTTAT TGAATCTCCC
AAACGAACAT TCATGCACAA ATTGGAGGCC ACTATGCCCA CCGATGATAC CCCTGTGTTG
GATCTGCCCA TGGCTACCAC CACCCCACCT AAACCCCCAT CCAACGTCGT CGACCTGGAT
CAGGTCCGTG CCGAGCATGG CAAACAGATG CGCAGTGAGG CTCAGGCTAT TGTCGATCTC
TGTGCCCTGG CTGGCATGCC TCACTTGGCA GGCGGCTATA TCGCCGAAGG TACTGCTGCT
GAGGCGGTAC GCAAAGAGCT ATTGGCCAAG CGGGCGGATG CTGAGGAGAT CCATTCCGAG
GTGATGCCTG GTGATGGCAC CCGTATGCAG CCCAGACAGA GTCTTGAAAC CAACCCGGTG
GTGGCCTCCT GCCGCAAACT CGCCGGTCAA TAA
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| Protein sequence | MTQNMLPHLA SRILGTPLMV DRARLETILS VIGPRVGLEP TAMPSGFEPK DHSSDLMVTP
NGIAIVPIHG TLVKRVGAVE AASGLMSYAS IEEKLLDAAT DPAVRAILMD IDSPGGEVGG
VFDLAAMIQE AGQGKPIWAL ADDAFSAAYL IASQAHRIIV PQTAGVGSIG VIAAHVDESE
KDAKEGRSYT TVFAGAHKND FSSHAPLSDA ARFNLQQEVD RLYGMFTGMV ASGRNISETA
VRATEAGLFF GDNAVKAGLA DHVGTIRDAL AGLTTLIESP KRTFMHKLEA TMPTDDTPVL
DLPMATTTPP KPPSNVVDLD QVRAEHGKQM RSEAQAIVDL CALAGMPHLA GGYIAEGTAA
EAVRKELLAK RADAEEIHSE VMPGDGTRMQ PRQSLETNPV VASCRKLAGQ
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