| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_2718 |
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| Symbol | |
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| ID | 4482570 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 3438205 |
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| End bp | 3441717 |
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| Gene Length | 3513 bp |
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| Protein Length | 1170 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639723463 |
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| Product | helicase domain-containing protein |
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| Protein accession | YP_866617 |
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| Protein GI | 117926000 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00349209 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTGAAAC TTGAAGACAT CAAAAAGAAC TGCCAGATCC GTGGCATCGA AAGCAACGAG
ATCGTCCGGG TGGTCAGCAT TGAACCCGTT GGTCACGATG CCCTTACGGT CTACTACAAA
AACAGCCAGG GCCGACTCGG GGAACAGATG CTGTTCCGCT CTGATGAAGG GCGGTTGGAA
CTGGCGCAGG AAGGACGGCC TTGGGGTTTC GATGCGCCGG GTCCCGACTT CAAGCTTGGG
GTGGAAGCGT TCCGGATCCA ATTGGCCCAC CTGTTCGATC CCATGATGGC GGTTCACACC
TCCAACGTGG AGCCCCTGCC ACACCAGATT TCCGCTGTCT ACGAGTCAAT GCTGCCCCGG
CAGCCGCTTC GGTACGTGCT GGCGGATGAT CCAGGGGCCG GCAAGACCAT CATGGCGGGC
CTGCTGATCC GGGAACTGCT CATGAGGTCT GACGCCAAGC GGATCCTGAT CGTTGCCCCG
GGCAGTCTGG TGGAGCAGTG GCAGGACGAG ATGTATGAGA AGTTCGGCGT GGAATTCACC
GTCTTCAGCC GGGAACTGGA TCAGGTCTCG CTCTCCGGCA ATGCCTTTGA TGAACACGAC
CGGCTTATCG CCCGGCTGGA TCAGCTCTCC CGCAATGACG AGTTCCAGGA AAAGCTGGCC
CACTCCGAAT GGGACCTGAT CATCGTCGAC GAGGCGCACA AGATGTCGGC CAGCTATTAT
GGTCAGAAGG TCAAGGAGAC CAAGCGCTTC AAACTGGGCA AGCTGCTTGG CTCCGTTTCC
CGGCACTTCC TGCTGATGAC GGCCACCCCG CACAACGGCA AGGAGACCGA TTTTCAACTC
TTCCTCTCCC TGTTGGATGG GGATCGCTTC TACGGCAAAT TCCGGGAAGG CGCGCACCGG
GTGGACGTAT CCGACCTGAT GCGCCGCATG GTGAAAGAGG AGTTGCTCAA GTTTGACGGC
ACGCCACTTT TCCCGGAGCG GCGCGCTTAC ACGGTCATGT ACGAGCTTTC AGACCTGGAA
GCCAGGCTCT ACGCCGATGT CACGGATTAT GTCCGCAACG AGATGAACCG GGCGGACAAT
CTAGATGGCA AGCGTAAGGG CACCGTCGGC TTCGCCCTGA CCCAATTGCA ACGCCGCCTA
GCCTCCAGCC CCGAAGCCAT CTACCAGTCC ATCAAACGCC GCCGCAAACG GCTCGAAAGC
CGCCTGGATG ATGAGCGGCT GGTGGCGCGC GGGCATAAGG TGGCGGAGAC CCTGGCCGAG
TACCATGTGG ACATTCCGGA GGATCTGGAC GAAGCCCAGG AAGAGCTGAG CGGTGGTGAA
TACGAGGATT GGGCGGAAAA GGTTGTGGAT CAGGCCACCG CCGCCCAGAC CATCCAGGAA
TTGGAAGCAG AAATCGAAAC GCTCAGGCTT CTGGAGATGC AGGCCAAGCT GGTGGTCCAT
TCCGGCAAGG ATCGTAAGTG GGAGGAACTC TCCTCGCTGT TGCAGGAAAA GCCGGAGATG
TTTTCCGCTT CCGGCCACCG CCGCAAGATG ATCATCTTCA CCGAACACAA GGATACCCTC
AACTACCTGC GGGAGCGGAT CGGCAGCCTG CTGGGAGCCC CGGGCGCCGT GGTGGTGATC
CACGGCGGCG TCAACCGGGA TGATCGCCGT AAGATTCAGG AGGAGTTCCG TAACAATCCG
GATGTCCTGA TCCTGTTGGC CACCGACGCC GCCGGCGAAG GTGTGAACCT CCAGAACGCC
AACCTGATGG TCAATTACGA TCTACCCTGG AACCCGAACC GCCTGGAGCA GAGATTCGGG
CGGATTCACC GCATCGGCCA GACGGAGGTC TGCCATCTCT GGAATATCGT CGCTCATGGA
ACCCGTGAAG GTGAGGTCTT TACAAAACTG CTCGAAAAGC TGGAGATAGA GCGCGCCGCC
TTGGGTGGCC GGGTGTTTGA CATCCTTGGT GAAGCCTTCG AGAACACCTC CCTGAAAGAG
CTGCTCATCG AGGCCATCCG CTACGGGGAA AGGCCCGATG TGAAAGCCCG GCTCAGCCAG
GTCATCGATG GCGCGCTGGA TACCGATCAC CTGAAGGGGA TCATGGCGCG CAATGCCCTG
TGCGAGGAAC ACATGTCCCT GGAGCAGCTC TATGCGGTGA AGGAAGAAAT GGAGAAGGCC
GAAGCCCGCA AGCTCCAGCC ATTCTTTATC CGCACCTTCT TCACCGAAGC CTTCCAGATC
CTGGGCGGAG AGATGCGACC ACGTGAGAGC GGTCGATTCG AGATCCGCCA CGTCCCGGCG
ACTATCCGGG AGCGGGATCG CGTCATCGGG GAGACCCGTA CACCTGTGCT GCGGAAGTAT
GAACGCATCT GCTTCGAGAA ACAGCAGGTG CGCCATCCCG GCAAGCCCAT GGCGGATCTG
GTTCATCCAG CCCATCCCCT GATGTCCTCG GTAACGGACT TGGTTCTGGA GGCGCACCGC
CCCAAGTTGA AGCAGGGAAC GATGCTCATC GATCCCAACG ACGAGGGAAC GGAACCCCGG
GTGCTGTTCC TGGTGGACCA CAACGTGCGG GAGAGCGCGG GAGATCAGCC TCGGGTGGTT
TCACGTAGGC TTCAGTTTGT TGGGGTGTAC GAGGATGGCC GCGCCGTCAA CGCGGGATGG
GCTCCCCACC TGGATTTCCA ACCGCTCGAT TCCTCCGAAC AGGAGTTGAT TCTCGATGTT
CTGACCGCCC CATGGATCAA CGCCAATCTG GAAGCCTTGG CGCTGGACCA CGCTTCACGC
AAGCTGGTCC CGGATCACTA CGAAGAGGTT CGTTCCCGGC GGGAGCGGCA GGCGGATCGG
ATTTTGGCCG CCGTCAATGA GCGGTTGGTC AAGGAGATCA ACCACTGGTC GGACCGCTAC
ATCAAGCTGA GCGATGACGT GGCCGCCGGA AAGCAACCCC GCATGCAGCC GGATCATGCC
AAAAAGCGGG TGGACGAGCT GACCGCTCGC CTGGAACAGC GAAAGAAAGA GCTAGCCACC
ATGCGCCACG TGGTTTCCAG CACGCCGGTG GTGGTGGGTG GCATGCTGGT GATCCCCCAG
GGCCTGTTGG CTCAGCGTCG CGGGGAACCC GGTTTCACCG CGGACGCCAT TGCCCGCAGC
CGGGTGGAAA AGATCGCCAT GGATGCGGTG ACGGCAGCCG AGCGGTCCAT GGGCCATCAG
ATTATTGATG TATCCGCTGA GAACTGCGGC TGGGATATTA CCGCTCGCCC GCCAACGGTG
GATGGGAAGA TGGTTCAGGA CCGGCACATC GAGGTTAAAG GTCGTGCCAA AGGCCAAAGC
ACCATCACGG TAACCCGCAA TGAGATCATC ATGGGCATGA ACCAGCAGGA GAAGTTCTGG
CTGGCCATTG TGATCGTGGA TGGCGACACC CATGAAGGCC CCTATTACGT TCGCAACCCG
TTCCATCAGG AGCCAGAGTT TGGGGTGGCG AGCATCAACT ATCAATTGAC GGATTTGCTC
TCCCGGGCCA CCCCGGCGAG CCAGACGGTA TAA
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| Protein sequence | MLKLEDIKKN CQIRGIESNE IVRVVSIEPV GHDALTVYYK NSQGRLGEQM LFRSDEGRLE
LAQEGRPWGF DAPGPDFKLG VEAFRIQLAH LFDPMMAVHT SNVEPLPHQI SAVYESMLPR
QPLRYVLADD PGAGKTIMAG LLIRELLMRS DAKRILIVAP GSLVEQWQDE MYEKFGVEFT
VFSRELDQVS LSGNAFDEHD RLIARLDQLS RNDEFQEKLA HSEWDLIIVD EAHKMSASYY
GQKVKETKRF KLGKLLGSVS RHFLLMTATP HNGKETDFQL FLSLLDGDRF YGKFREGAHR
VDVSDLMRRM VKEELLKFDG TPLFPERRAY TVMYELSDLE ARLYADVTDY VRNEMNRADN
LDGKRKGTVG FALTQLQRRL ASSPEAIYQS IKRRRKRLES RLDDERLVAR GHKVAETLAE
YHVDIPEDLD EAQEELSGGE YEDWAEKVVD QATAAQTIQE LEAEIETLRL LEMQAKLVVH
SGKDRKWEEL SSLLQEKPEM FSASGHRRKM IIFTEHKDTL NYLRERIGSL LGAPGAVVVI
HGGVNRDDRR KIQEEFRNNP DVLILLATDA AGEGVNLQNA NLMVNYDLPW NPNRLEQRFG
RIHRIGQTEV CHLWNIVAHG TREGEVFTKL LEKLEIERAA LGGRVFDILG EAFENTSLKE
LLIEAIRYGE RPDVKARLSQ VIDGALDTDH LKGIMARNAL CEEHMSLEQL YAVKEEMEKA
EARKLQPFFI RTFFTEAFQI LGGEMRPRES GRFEIRHVPA TIRERDRVIG ETRTPVLRKY
ERICFEKQQV RHPGKPMADL VHPAHPLMSS VTDLVLEAHR PKLKQGTMLI DPNDEGTEPR
VLFLVDHNVR ESAGDQPRVV SRRLQFVGVY EDGRAVNAGW APHLDFQPLD SSEQELILDV
LTAPWINANL EALALDHASR KLVPDHYEEV RSRRERQADR ILAAVNERLV KEINHWSDRY
IKLSDDVAAG KQPRMQPDHA KKRVDELTAR LEQRKKELAT MRHVVSSTPV VVGGMLVIPQ
GLLAQRRGEP GFTADAIARS RVEKIAMDAV TAAERSMGHQ IIDVSAENCG WDITARPPTV
DGKMVQDRHI EVKGRAKGQS TITVTRNEII MGMNQQEKFW LAIVIVDGDT HEGPYYVRNP
FHQEPEFGVA SINYQLTDLL SRATPASQTV
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