| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_2604 |
|---|
| Symbol | |
|---|
| ID | 4482229 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | - |
|---|
| Start bp | 3303295 |
|---|
| End bp | 3304500 |
|---|
| Gene Length | 1206 bp |
|---|
| Protein Length | 401 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 639723348 |
|---|
| Product | MT-A70 family protein |
|---|
| Protein accession | YP_866506 |
|---|
| Protein GI | 117925889 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG4725] Transcriptional activator, adenine-specific DNA methyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACCT ATGAATTTCA CCCCATCGCC GACATCTTCC CGTTGATGTC AGAGCAGGAA
CTCAATGAGC TGACCCAGGA CATGCGTGAT CATGGGCAGC GTGAACCCAT CTGGCTGCAT
GCCGATGGCC GAATTCTGGA TGGTCGGAAC CGTTACAACG CCTGCTGCAC CATCGGAGCA
GAGCCATCTG TAGAAATCTA CCAGGGGGAT GACCCCGTGG CGTTCTCTAT CAGTCTCAAC
CTACACCGCC GTCATCTTAA CGAATCCCAA CGGGCCATGG TGGCAGCACG ATTGAAGCCC
ATGTTTGAGG AGGAGGCGCG TTCACGGATG TTACAGGGAG GCTCATCAGA CCCTATGGCA
AATTTGCCAC AAGGTAAAGT TGGGGCTTCT CGTGAACATG CTGCGGAATT GGCCAACGTA
TCAGCACGGT CCGTCGAAAG CGCATCCCGC GTCCTACGCA AGGGCACCCC TGACCTAATT
GAGAAGGTGG ATAAGGGCAA TGTGTCGGTA TCAGCGGCAG CCGATGTTGC CAACTTATCA
GAAAATGAGC AACAGGTGGT GGTGGCCAAA GGAGAGGAGG CCATCCTGGA GGCAGCCAAG
GAGATCCGCT CTCGCAAAGC CAAGGAAAAT GCCGCTTATC GAGCACAGGT ACGTGCCGAT
GCCCTCAAAA TGGATCTACC TGATGGAAAG TACCGCACCA TCATCATCGA CCCCCCGTGG
CCCATGCAGA AGGTCGAACG GGATCAGCGA CCCGACCAAG TGGGGTTCGA CTACCCCACC
ATGAGTGAGG TGGAGTTGGC TGATCTGGAT GTGGGTGGGC TTGCCCATGA AGAGTGTCAC
CTCTTTCTCT GGACTACCCA GAAGTTTCTG CCCATGGCCA TGCGGTTGAT GGAGAAGTGG
GGCTTTCCCT ACATTTTCCA GATGGTGTGG CACAAGCCAG GTGGTTTCCA ACCTTTTGGA
TTGCCCCAGT ATAACTGTGA ATTTGTGTTG TTCGGACGCA AGGGGAGTCT TGAGTTTCTG
GAGACCAAAG CGTTCTCCAC CTGTTTTGAC GCGCCTCGCC GTGAACACAG CCGAAAACCC
GATGAGTTCT ATGATCTGAT CCGGCGGGTT TCTCCATCCC CACGCATCGA TGTGTTCTCT
CGTGAACAGC GGGAGGGGTT TGATACCTGG GGGGCAGAGA GTGGCAAGTT TGGAGAGGTG
GCATGA
|
|---|
| Protein sequence | MKTYEFHPIA DIFPLMSEQE LNELTQDMRD HGQREPIWLH ADGRILDGRN RYNACCTIGA
EPSVEIYQGD DPVAFSISLN LHRRHLNESQ RAMVAARLKP MFEEEARSRM LQGGSSDPMA
NLPQGKVGAS REHAAELANV SARSVESASR VLRKGTPDLI EKVDKGNVSV SAAADVANLS
ENEQQVVVAK GEEAILEAAK EIRSRKAKEN AAYRAQVRAD ALKMDLPDGK YRTIIIDPPW
PMQKVERDQR PDQVGFDYPT MSEVELADLD VGGLAHEECH LFLWTTQKFL PMAMRLMEKW
GFPYIFQMVW HKPGGFQPFG LPQYNCEFVL FGRKGSLEFL ETKAFSTCFD APRREHSRKP
DEFYDLIRRV SPSPRIDVFS REQREGFDTW GAESGKFGEV A
|
|---|
| |