Gene Mmc1_2563 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_2563 
Symbol 
ID4483630 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp3271862 
End bp3272188 
Gene Length327 bp 
Protein Length108 aa 
Translation table11 
GC content51% 
IMG OID639723310 
Producthypothetical protein 
Protein accessionYP_866468 
Protein GI117925851 
COG category[S] Function unknown 
COG ID[COG4679] Phage-related protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.23616 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATGGT CGATCACTTT TTACAATGTG AACGTGCAGC AGGAGATCCG CTCCTGGCCT 
GTTGGTATTC ACGCTGATTT TCTTCGCTTG GTCCAACTGC TGGAGGAGTT CGGCATGGAC
CTGCGCATGC CCCATTCCCG TGCCATGGGA AAAGGATTGT TTGAATTGCG CTGCAAAGGG
TCAGAGGGCA TTGGTCGAGC GTTTTACTGC ACGGTCAAAG GGCAGACCAT TGTGATCCTG
CACTCGTTTA TCAAGAAAAC CCAAGAGACC CCTGCGAAAG AGCTGCGTAC TGCGCAGAAA
CGTCTCAAGG AGGTGAAAAA TGGCTGA
 
Protein sequence
MKWSITFYNV NVQQEIRSWP VGIHADFLRL VQLLEEFGMD LRMPHSRAMG KGLFELRCKG 
SEGIGRAFYC TVKGQTIVIL HSFIKKTQET PAKELRTAQK RLKEVKNG