| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_2531 |
|---|
| Symbol | |
|---|
| ID | 4483846 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | + |
|---|
| Start bp | 3222009 |
|---|
| End bp | 3223184 |
|---|
| Gene Length | 1176 bp |
|---|
| Protein Length | 391 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 639723279 |
|---|
| Product | FAD dependent oxidoreductase |
|---|
| Protein accession | YP_866437 |
|---|
| Protein GI | 117925820 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0578] Glycerol-3-phosphate dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.58896 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0803699 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAGCT ATGACTATGA TGTGGCGGTG GTTGGCGGAG GCATCCACGG TGCCGGGGTG
GCACAAATTG CGGCCCATGC GGGTTGGTCC TGCGTGGTGT TGGAGCAAGC GCATGTGGCA
GCGGGCACCT CTAGCCGATC CAGCAAATTG ATCCATGGTG GCTTGCGCTA TCTACAACAG
ATGCAGTTTG GTTTGGTGCG GGAGTGTTTG CAAGAGCGCA CCCGTTTGTT ACACGTGGCC
CCTCAGTTGG TCCGGCTAAT CCCCTTTTAC CTACCGGTCT ACCAGCACGC TAGCCGCCCC
CCCTGGATGA TCCGTGCAGG GCTCACCCTA TACGCCATGT TGGCGGGCCG CAACCCGGGC
GGCCATTATG AACGCCTACC GCAATCCCAG TGGGATACGC TAGGGGGTCT GCGGCAGAGC
GGACTGAAAC AGCTTTTTTG TTATTACGAT GCCCAAACCG ATGATCGTGC CCTAACTGTG
GCGGTGATGG CATCCGCCCA ATCATACGGG GCTCAATTAT GGTGCGCGAC CACGCTGCAA
CAGCTCCACC GTTTACCCCA AGGCTACCGT TTAAGTGGTC AACGTGGCGC GGTAACCTTT
ACGATCCAAG CCCGTGTGGT GGTCAACGTG GCCGGGCCAT GGATCGGCAC CGTGGCAGCC
AAGTGTCAGC CACCCCTGGA GCTACCCCCC TTTGCGCAGG TGCAGGGTGC GCACCTTAGC
CTGCCCAACT GGCATCCTCC TGGGGCTTTT ACCCTGCAAT CGCCCCTGGA TGGGCGGGTG
TTTTTTGTCC TGCCGTGGCA GGGCGGCGCT CTGCTAGGCA GCACCGAGAC GCCCTTTGAT
GGCGACCCTG CCCAGGCGGC ATGCACCCCC CAAGAGCAGG CTTACTTGCT TGAATCCGCA
CACCCTTTTT TCCCCCAGGC GGATATGACC GTCGGTGCCA GCTTTGCGGG CATCCGGGTA
TTGCCCAAGG GGGATGCCAA CCGCGCATCC CGCGAGGCGC TTTTGCCGGT AGACGACCCC
ACCAAGCCGC GATTGGTTAC GCTGATCGGC GGTAAACTCA CCAGTTACCA CCCCACCGCC
CGAGCCATTA TCAAGCGGTT GCAAGGGGCG CTCCCCCCGG CCAACACGGC GGGCGATCCC
GGTTTGCTGC CCCTGCCGCC AACGACACCC CCTTGA
|
|---|
| Protein sequence | MASYDYDVAV VGGGIHGAGV AQIAAHAGWS CVVLEQAHVA AGTSSRSSKL IHGGLRYLQQ
MQFGLVRECL QERTRLLHVA PQLVRLIPFY LPVYQHASRP PWMIRAGLTL YAMLAGRNPG
GHYERLPQSQ WDTLGGLRQS GLKQLFCYYD AQTDDRALTV AVMASAQSYG AQLWCATTLQ
QLHRLPQGYR LSGQRGAVTF TIQARVVVNV AGPWIGTVAA KCQPPLELPP FAQVQGAHLS
LPNWHPPGAF TLQSPLDGRV FFVLPWQGGA LLGSTETPFD GDPAQAACTP QEQAYLLESA
HPFFPQADMT VGASFAGIRV LPKGDANRAS REALLPVDDP TKPRLVTLIG GKLTSYHPTA
RAIIKRLQGA LPPANTAGDP GLLPLPPTTP P
|
|---|
| |