| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_2512 |
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| Symbol | |
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| ID | 4482487 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 3202210 |
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| End bp | 3202872 |
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| Gene Length | 663 bp |
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| Protein Length | 220 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639723260 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_866418 |
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| Protein GI | 117925801 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00290305 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.550501 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGTCAGAT ACTTTGGAGG TGACATGGCA GTTCAGGATC GAAAAGCACG GGAGTTTGCC
AGGCGCGAGC GGGAAATTTT GGATGCGGCC TTAGAACTGA TGGATCAGCC GGAGTGGCAA
ACGGTGACGG TGGCGGATAT TGCCCGTGCT GCGGAGATTG GTAAGGGCAC CATCTATAAA
CATTTTCCCA GCAAAGATAC GTTGTATGCC CAGCTCTCTA TTGAGTTTGG TAAGGATTTT
TACCACACCT TAACCGACCA TTTGGACATG CAGCAGCCGG TCATTCCGCT GCTAAGGGCG
CTGCTGGAAC GGTTGTGGAA TCTGCATCTA TCGGGGCAAA AGTATCATCG GCTACTACTC
TATTGCAGTG CCAAGGATTT TCGGGAGCGC TTGCCAGAGA GTTACCGCTC ACTGTTGCAG
CATAAGGATG AAGCCTTTGA GCGGCTGTTT GCGGGCATAC TCGCCCGTGG CGTGGAAGAG
GGGGTGTTCC CCCGAGGTAT TCCGTTGGAA GAGATGTTAC GCACCGCGCG GGCTGCCTTT
GAAGGGGGGA TCGCCATGCT TTGGAACCGG CTGGATGATG GGGTGGATAA GGTTCAATTT
ACCCAGCGTA TGACCCAGTT TGTATTGAGC GGTCTCTGTT ATATGGATCG AGAGAGGGGT
TAG
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| Protein sequence | MVRYFGGDMA VQDRKAREFA RREREILDAA LELMDQPEWQ TVTVADIARA AEIGKGTIYK
HFPSKDTLYA QLSIEFGKDF YHTLTDHLDM QQPVIPLLRA LLERLWNLHL SGQKYHRLLL
YCSAKDFRER LPESYRSLLQ HKDEAFERLF AGILARGVEE GVFPRGIPLE EMLRTARAAF
EGGIAMLWNR LDDGVDKVQF TQRMTQFVLS GLCYMDRERG
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