| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_2487 |
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| Symbol | |
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| ID | 4484157 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 3173164 |
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| End bp | 3174246 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639723235 |
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| Product | hydrogenase formation HypD protein |
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| Protein accession | YP_866393 |
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| Protein GI | 117925776 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0409] Hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR00075] hydrogenase expression/formation protein HypD |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.252793 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCAGG CCAAGGTGTG GTTGGAAAAG CTGCAACAGC TGCCGCGCCC GGCGGGGCGG
GTGGCGATTA TGAACGTCTG TGGGGGGCAT GAGCGCTCCA TCACCATGGC CGGTTTGCGG
GGGGTGTTGC CGGACTATGT ACGGTTGGTG CCGGGGCCGG GTTGCCCGGT CTGTATCTGT
CCCGAGGGGG ATATCCATGC GGCTATCCGG CTGGGGTTGG AGGATGGTGC GCTGGTGTGC
GCTTTTGGGG ACATGCTGCG GGTGCCCATC AACCGGGGGC GGGCCGAGGT GCGCTCTTTG
GAACAGGCGC ACGCCAGCGG TGCGGACATT CGCCCGGTGG CCTCGCCCAT GGAGGCGGTC
GCCTTGGCCC AGCAGAACCC CCAGCGGCAG GTGGTGTTTT TCGCGGCGGG GTTTGAGACC
ACCATGGCCC CGGTGGCGGC CATGCTTGCC CAGCAGCCGC CGGATAACTT GACGGTGTGG
TTGGCCGGGC GACTAACCTG GCCTGCGGTG TCGCTGTTGT TGGAGAGTGG TACGCCGGGC
TTTGATGCCT TGGTGGCACC GGGCCATGTG GCCACCGTGA TGGGGCCGGA GGAGTGGGAT
TTTGTTTGGC AACACCACGG CATAGCCACA GCGGTTGCGG GTTTTTTGCC CGATTCGCTG
TTGGCGGCCT TCTATTCGGT GCTGCGTCAG GTGAGCAGCG GTCAGCCCAT GCTGGACAAC
TGCTATGCCG AGGTGGTTCG GGCCGGGGGT AACCCCTTCG CAAAACAGAT TTTGCAGCAG
GTGTTTGAGG TGGTGGATGC CCCATGGCGC GGGGTGGGCA CCATTCCCGC CTCGGGTTAT
GCCATAAGTG AGGCGTATGG CGGGTGGGAT GCCCGGCGCC GTTTTCCCCA TCAATGCCAG
GATGAAGGGG ATGAGCAAAT GCCCCCCGGC TGTGATTGTG CCCGTGTGGT GATGGGCAAA
CTGGAGCCGG TGGCGTGCCG TCTTTATCAG ACCGCTTGCA CGCCCCGTAC ACCGGTGGGG
CCCTGTATGG TCTCCGACGA AGGGGCGTGC CGCATTTGGT GGAGCGGTGG TGTCAGAAAG
TAG
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| Protein sequence | MMQAKVWLEK LQQLPRPAGR VAIMNVCGGH ERSITMAGLR GVLPDYVRLV PGPGCPVCIC
PEGDIHAAIR LGLEDGALVC AFGDMLRVPI NRGRAEVRSL EQAHASGADI RPVASPMEAV
ALAQQNPQRQ VVFFAAGFET TMAPVAAMLA QQPPDNLTVW LAGRLTWPAV SLLLESGTPG
FDALVAPGHV ATVMGPEEWD FVWQHHGIAT AVAGFLPDSL LAAFYSVLRQ VSSGQPMLDN
CYAEVVRAGG NPFAKQILQQ VFEVVDAPWR GVGTIPASGY AISEAYGGWD ARRRFPHQCQ
DEGDEQMPPG CDCARVVMGK LEPVACRLYQ TACTPRTPVG PCMVSDEGAC RIWWSGGVRK
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