Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_2446 |
Symbol | |
ID | 4482968 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 3117255 |
End bp | 3118460 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 639723194 |
Product | phosphopentomutase |
Protein accession | YP_866352 |
Protein GI | 117925735 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1015] Phosphopentomutase |
TIGRFAM ID | [TIGR01696] phosphopentomutase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.892487 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGCGTG TTGCTATTGT GGTTATTGAC TCTATGGGGA TTGGTGCCAT GCCGGATGCC GCTGCGTATG GGGATCGGGC CAGTTGTAAT ACCCTTGGAA ATGTTGCGCG ACATAACCAT GGGCTGTCGT TGCCTCATCT GCAATCCCTG GGCTTGGGCA ATCTATTGAC TGTCGCAGGC GTGCCTGCCA TTCAAGAGCC TCTGGGCTGC TTTGGGCGTC TCTTGGAGGC TTCTCAAGGT AAAGATACCA CCACCGGCCA TTGGGAGATG GCGGGCTTGG TGTTGGACAA GCCGTTTAAG GTTTATCCCG AGGGTTTTCC TCAGGCATTG ATGCAAGCCT TTGTGGAACA ATCCGGCTGC GGGGGCTATT TGGGCAATAT TCCAGCCTCT GGGACCGCTA TCATTGAGGA GCATCACCAA CGCCACTGTG AAACCGGTTA TCCCATTATT TACACCAGTG CCGATAGTGT GTTTCAAATT GCCTGCAATG TGGATGTGGT GCCGTTACAG AGGCTCTATG CTTGGTGTGA AACAGCGCGG GCTTTGCTGA CCGACCACTA TAATGTGAGT CGGGTGATTG CGCGTCCCTA TCGACCGGTG GCAGGGGGGT TGCAACGGCT ATCAGCGGAT CGGCGGGACT ATTCGGTTAA ACCGCCCTAT CCCTCATTAT TGGATAAAGT TTTGCAAAAT AAGGGGCAGG TGATTGCGAT TGGCAAAATT GAGGATATCT TTGTAGGGTC GGGTATCTCT CACGCCATAC ACACCGGTTC TAATCAAGAG GGGCTTTTGT TGACGCAGCA GGCTCTGGCG GGTGAACTGG ATCTGGATGG TCTCGCCGTG GAGGGGGCTA CAAACGGGCA AGCGGCCCAA TGTGCACTGA TTTTTACCAA TTTGGTGGAT ACAGACATGT TGCATGGGCA CCGCAATGAT GCAAAAGGGT ATGGCCAGGC GCTGGAGGAG ATTGATCGCC ATTTGGGTAG GATGCTGCCC CTGTTGGGGC CAGATGATCT GTTGATCATT ACCGCCGATC ATGGTTGTGA TCCCACCGAG CCGGGCACCG ATCATACCCG CGAGATGGTG CCACTCTTGA CCTACTCCCC GGGTGGGGCG GTGGGGCGCT TGGAAGATCG CGGCGCGTTT ACCCACATTG CCCATCTCAC GGCAGAGTGG CTCGGGTTTG CCAGTGAAAG CCATTGGATC CGTTAA
|
Protein sequence | MKRVAIVVID SMGIGAMPDA AAYGDRASCN TLGNVARHNH GLSLPHLQSL GLGNLLTVAG VPAIQEPLGC FGRLLEASQG KDTTTGHWEM AGLVLDKPFK VYPEGFPQAL MQAFVEQSGC GGYLGNIPAS GTAIIEEHHQ RHCETGYPII YTSADSVFQI ACNVDVVPLQ RLYAWCETAR ALLTDHYNVS RVIARPYRPV AGGLQRLSAD RRDYSVKPPY PSLLDKVLQN KGQVIAIGKI EDIFVGSGIS HAIHTGSNQE GLLLTQQALA GELDLDGLAV EGATNGQAAQ CALIFTNLVD TDMLHGHRND AKGYGQALEE IDRHLGRMLP LLGPDDLLII TADHGCDPTE PGTDHTREMV PLLTYSPGGA VGRLEDRGAF THIAHLTAEW LGFASESHWI R
|
| |