Gene Mmc1_2439 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_2439 
Symbol 
ID4482961 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp3109742 
End bp3110935 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content56% 
IMG OID639723187 
Producthypothetical protein 
Protein accessionYP_866345 
Protein GI117925728 
COG category[R] General function prediction only 
COG ID[COG2081] Predicted flavoproteins 
TIGRFAM ID[TIGR00275] flavoprotein, HI0933 family 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAATCT ATAGCGTGAA GCCCTCTCCA TACGATTTGA GTGTCATAGG TGCCGGTGCG 
GCGGGTCTGG TGTGCGCCAT CGAAGCGGCT CGGCGGGGGT TGCGTGTGGT GGTGCTGGAC
CATGCCCGAC AGGCGGGAGA AAAAATTCGT ATCTCTGGCG GTGGACGCTG TAATTTTACC
AATCTCTCGT TATCCCCGGA TAACTATATT TCACACAATC CAAAATTTTG TCTCTCGGCC
CTCAAGGGCT ATTCACCCTA TGATTTTATG GCACGGTTGG ATCTTCACCA TATTCGTTAT
GAAGAGAAAG AGGCCGGTCA GCTCTTTTGC CAAGGCTCCG CCAAAGAGAT TGTGGCTATG
CTGTTGCAGG AGGCCACAAC CGCAGGTGTT GTGCTGAAAA TGGGCCACAC CGTGCATACC
GCCCGCGCCT TGGGGGATGG CTATGAGGTG CTCTGCAAGC AGGGGAACTA TCAAACGCCG
CGCTTGGTGG TGGCCAGTGG AGGACTCTCT ATACCAAAAA TGGGGGCCAC CGATGTGGGG
TTGCGCATTG CGCGCCAATT TAAGCTGCCT GTGGTGGAGA CCCGCCCCGC GCTATGTCCC
TTTCTTTTTG AAGGGGGTCT GCAAAAAATG TTTTCTAGCC TAAGTGGCTT GTCAACACCC
GCGACGTTAA CAACCGGTGG TGTATCTTTT ACCCATCAGC TACTGTTTAC CCACCGGGGG
CTGAGTGGTC CTGTCGCCTT GCAAGCCTCG AGCTATTGGC AGCGTGGTAG GGCACTGCTG
CTTAACTTGC TGCCGGAACA GGATGCTTTG GCGCTTTTGT TGGCGGCCAA ACAGGGCGAA
CCCCGGTTAC AGGTGACAAC CCTGCTTAGT CGTTATCTGC CCAAACGTTT GGCCCAAGCT
TTGGCTGTGG GGCTCGATGC CCCCTTGGCC GAGTTGCCCG ACCAACGCCT TAAACAACTG
GCAAACCAGC TAAACGGGTG GTCGCTCACG CCTGCTGGGT TAGAAGGCTA CCGCACCGCC
GAAGTAACGG CGGGTGGGGT GGACACCGCC ATGCTCTCCT CTAAAACCAT GCAGGTTAAG
GCGCGCCAGG GGCTCTGTTT TATTGGTGAG GTGGTGGATG TAACCGGCCA ACTGGGCGGC
TATAACTTAC AGTGGGCTTG GTCCTCGGGG GTGGCAGCGG GGCGCTATAT TTAA
 
Protein sequence
MEIYSVKPSP YDLSVIGAGA AGLVCAIEAA RRGLRVVVLD HARQAGEKIR ISGGGRCNFT 
NLSLSPDNYI SHNPKFCLSA LKGYSPYDFM ARLDLHHIRY EEKEAGQLFC QGSAKEIVAM
LLQEATTAGV VLKMGHTVHT ARALGDGYEV LCKQGNYQTP RLVVASGGLS IPKMGATDVG
LRIARQFKLP VVETRPALCP FLFEGGLQKM FSSLSGLSTP ATLTTGGVSF THQLLFTHRG
LSGPVALQAS SYWQRGRALL LNLLPEQDAL ALLLAAKQGE PRLQVTTLLS RYLPKRLAQA
LAVGLDAPLA ELPDQRLKQL ANQLNGWSLT PAGLEGYRTA EVTAGGVDTA MLSSKTMQVK
ARQGLCFIGE VVDVTGQLGG YNLQWAWSSG VAAGRYI