| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_2435 |
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| Symbol | |
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| ID | 4482957 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 3104702 |
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| End bp | 3105712 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639723183 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_866341 |
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| Protein GI | 117925724 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1089] GDP-D-mannose dehydratase |
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| TIGRFAM ID | [TIGR01472] GDP-mannose 4,6-dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.977894 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACCG CCCTTATTTG TGGCGTGACT GGCCAAGATG GCGCATGGTT GGCCCTGCTG
TTATTATCCA AGGGCTATCG GGTGGTGGGG ACCTCGCGGG ATGCCCAGAT TGCGACCCTG
ACCAAATTGG ATCTGCTGGG GGTGCGGGAG CGTATTGAGC TGCGCTCCAT GACACCCACG
GATTTTCGCA GTGTGGTGCA GACGTTGATT CAGGTGGAAC CGGATGAGAT CTATAACCTC
TCTGGGCAGA GCTCGGTGGG GCTCTCTTTT CAGCAGCCTG TGGAGACCCT GGAGAGTATC
TCCCAGGGTA CCCTGAATTT GCTGGAATCA ATGCGTATGA TCAATAAATC AATCCGCTTT
TATAATGCGG GTTCCAGTGA ATGTTTTGGC GATACCGGTG ATCTGGCCGC CGATGAGCTC
ACCCCCTTTC GCCCGCGCAG CCCCTATGCG GTGGCTAAAT CCGCCTCGGT ATGGAGTGTC
TCTAATTATC GGGAGGGCTA CGCCATGTAT GCCTGTTCCG GCATTTTGTT TAATCATGAA
TCTTGGTTGC GACCGGCCCG CTTTGTGACC AGCAAGGTGA TTAAAACCGT CAACCGTATT
GCCCAAGGCA GCGGTGAGCA GCTGCAACTG GGCAATATGG ATATTAGCCG TGACTGGGGT
TGGGCCCCTG AATATGTCGA GGCGATGTGG CGAATTTTAC AGCAAGAGAA GCCCGAGGAT
TTTATTATTG CAACGGGTTA TACCGCTTCT CTACAAGAGT TTGTGGCGCT GGCCTTTGCC
GCCCATAATC TGGATTGGCG GGACCACACC AGGAGTGATG CCAGCCTGTT ACGGGAGACC
GATATACGGA TTAGTCGGGC CAATCCGCAA AAGGCACGGG AGCGGTTAGG TTGGCAAGCA
ACCCTAACCA TGCCGGACGT GGTGGCGCGT ATGGTGGAGG CCGAAAAACT GCTTTCCCAG
CGGGCCGCCC CTTGCCAGGT GGAACCTGCT CCAGCCTCTC TGTTACGATG A
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| Protein sequence | MKTALICGVT GQDGAWLALL LLSKGYRVVG TSRDAQIATL TKLDLLGVRE RIELRSMTPT
DFRSVVQTLI QVEPDEIYNL SGQSSVGLSF QQPVETLESI SQGTLNLLES MRMINKSIRF
YNAGSSECFG DTGDLAADEL TPFRPRSPYA VAKSASVWSV SNYREGYAMY ACSGILFNHE
SWLRPARFVT SKVIKTVNRI AQGSGEQLQL GNMDISRDWG WAPEYVEAMW RILQQEKPED
FIIATGYTAS LQEFVALAFA AHNLDWRDHT RSDASLLRET DIRISRANPQ KARERLGWQA
TLTMPDVVAR MVEAEKLLSQ RAAPCQVEPA PASLLR
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