| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_2252 |
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| Symbol | |
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| ID | 4481596 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 2877320 |
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| End bp | 2880388 |
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| Gene Length | 3069 bp |
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| Protein Length | 1022 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639723001 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_866159 |
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| Protein GI | 117925542 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0647167 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCATT CCACACCGCG AACCGTGTCT CACTGGATGG AGCAATCTCT AGCTGACGTA
GCGGATGCGT CGCAGGCTCA GGGGGATGCC ACAGCTACGC CTGCTATTGA GCCCATGGAC
GATACGCAAC GCGCGCTCTT CCCGAATCAT GATGATCTGT TTTTGCCTAT GCATCGCCTA
GACCCTGAGC ATGTTTCTGA TCTTCTGATG GCTCCAGCAC AGCGTCGTGG TTATATAGAG
GTAGCCGCTT CATCTGCTGT GCAGAAGGAG GCGATGGAGG CGCCGTCGCC CTTGAATAGT
CGTGCGGAGT CCACACGTCA GTTCAGCAAG GTAGAGGAAG AGCGTCATCG CCGCGTGGTG
CAGGTAGGCA CACCTATCAA CCGCAGCAAT GTGGTGATTT TGCCGAAAAG GGAGATGGTT
GGTGCCGTTG ATTATGCGGC GTTTTTACGT AGCCGTGAGC AGCACACATC ACAGCATGGG
CCGGTTGTTG AAGAGACTCC TGATTTCAAC ATGGAGAATC AATCTCAACA GCCAGTTGGT
GGCTTGCTTG AGGCGACTTA TCCCCTCTCT CGTGGTTCTG GCGTTGTCTC TGAGAATAAT
GCTCAATGGG TGGAAAAGCC GGGCTTGCGG GATGGCCTAA AGGTCGAGCC CTCTCATGCA
TTGCGGGAGG GTTCAGAGCT TTTGGAGGCT TCTGCGTTCA AGGCGTCACC TCTTGACAGG
CTGGAACACG AAGAGGGTGC GCTTTTATTG ACAGAGACGG GGTGGTCCAA CGAATCACGG
CGGGAAGTGG TTGCGCCTGC ACGAGAAGAG GCGGACGTCA CCCAAAATAG TGAGCGCTTA
TTTCAGCAAA ATTCAGTGCC TTCGCATGAA CAAGTGATGA CCTTTGTGCA GATTGATAAT
CTGCTCAATC AGGTCTTGGC GGATCGATTG CTTGTGCAAA GCCAAGAACC CTCAAACAGC
GGTTCGAATG TCGATTTTCC TGCCATTTCT CTCCTGCACA CAGATCAAAC AGCGTTTTTG
GGGCTTCCTG ATACAATCCT TGATCCACAC CGCCCTCGTG TGGATGAACA GGGCGGGCTG
TTTTACTCGG ATCTACCACC TGCTGCCGAA CCGCACATGT TGGACGAAAG CGAAAACCTA
GGATCTAGGC CAGGTGTTGT AGCGGCTCCA GAAGCCGAGT CCGTTCAGGA GGTCGAGTCC
GTTCAGGAGG TCGAGCCCGT TCAGGAGGTC GAGCCCGTCC AGGAGGTCGA GTCCGTTCAG
GAGGTCCAGC CCGTTCAGGA GGTCGAGTCC GTTCAGGAGG TCGAGTCCGT TCAGGAGGTC
GAGCCCGTTC AGGAGGTCGA GCCCGTCCAG GAGGTCGAGT CCGTTCAGGA GGTCCAGCCC
GTTCAGGAGG TTGAGTCCGT TCAGGAGGTC GAGCCCGTCC AGGAGGTCGA GCCCGTTCAG
GAGGTCGAGT CCGTTCAGGA GGTCGAGCCC GTTCAGGAGG TCGAGTCCGT TCAGGAGGCC
GAGTCCGTTC AGGAGGTCGA GCCCGTCCAG GAGGCCGAGT CCGTTCAGGA GGTCGAGTCC
GCCCCAGTGG AAGAGGAGCG CGGGGTAGAG AAAACCCCCG GCGTGGTGCC AACGGCAGAA
GCTACTCACG AAGCGGCGCG TGGGGCTGTA GAAAATGGTT CTGAAGGTGA TGCTTCTGGC
GGGTTGCAGC ATGGGTCGGA TAGGCCAGTC CACCGCGCAC AGCGGCCTGA CGGATACGCT
TCAGCGTTTT CCGCTCCTGT TGCATCCATA GCGGCCAATA AGAGTGCCGC GGGGATGGAT
CCCGCGCAGC TCCACAAACC GGGGTCGGGT CTGTCAGGGC CTGAGGCCGG TGGCAAGCAA
CAGGCTACCT CGGTGGTCCA GGGAAAAGAG GCAATGGCGT TGGCGGGGGG GGCAGTGCAG
GGGGGCAGCA CGTTTACGCA AGCGAGCTTT GACTCTGCTT CGAGCGTTAC CGTTAGCCGA
GTGGCACAAG ATATTTTGGA ACAGCTCGAC AGAGATGAAC AGCTTAGTGA GCCAACCTCA
AGCCACGGGT TGGGAACGGT GCAAATACCA GCCCATGAGC TGGCCGATGT TCAATTGGAT
GAGCAGAGCG GTCTAATTGT CGATGAGATC CCGGTCTTAG AGACAACCCG CATCCAACAA
CGTCGCTCTT TAGCCAATCA AGCCCGGGAA CAGGTGGCTC AAAAAGCCGC TGCGAACCCA
AAAGAAAAGG AGTATGGGTC TTCTTTTTCA TGGGCCAACG GTTTTTTGTT TGGACGAATG
AAGTCTCATC GTATAAAACT GGCCGCCGCA GCCCTAGAAG CTCCTGTGCG TATCGAGCCG
CAAATTCGCA GGCCGAAACC GCTGGTCAGT CGTCTTGGCC AACAAAGTGG TTTGCCCAAA
ACCATGTGGC TGGCTTTTGG TTGGTATGCC TGTGGGGTGA TTCTGGAAAA TCTAAGTTCG
GGGGCCATCC GTTGGTACCA GGGTTTAACC CGCTTGGATG GGGATGTGCA GGTCGCGTTC
CTTATGGATC GTGCCCGGCA TCTGCAACGC CTGGGACGGC AGGATGAGGC CCAACCCTTG
TTGGAGCATG TGCTTAATGC CCCACAGGCA CCGTGTTCGG CCTATCTGTT ACTTGCGGAT
GTGTTTAAAG CACAGGGAGC CCCTGATCGC GAAGAGCAGG TGCTGTTTAA GGCGCTTAAT
AAGGGTTATG ATGACTGTGA GCTCTTTCTG CGTCTGGGAC TGTTAATGCA GCGGAGCAAA
CGGCGTGAGT CGGCCATTGC CTACCTGCGG CAATGTGTGG CGATCAATCC CGATCTCTAC
GAAGGTCTTT GCGCTTTAGC CCAGAATCTA GGCCATGCCG GTTTACCCCA TGAGGGGTTG
GCACATCTTG AGCGGGCTCG GGAGATCCGT CCATACGATC CCCATGCCTT TATGCTGACA
GCGGAAATCC TTGAGCGTTT GAATGAGCAT GAAGATGCCG CGCTATTCTA CCAACATGTT
GATGAACTGA ATCAGATGTT ACAAGTCAAA CCTGCCCACG AGCAGGTGGT CGAGGATGAA
TTGAGTTGA
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| Protein sequence | MSHSTPRTVS HWMEQSLADV ADASQAQGDA TATPAIEPMD DTQRALFPNH DDLFLPMHRL
DPEHVSDLLM APAQRRGYIE VAASSAVQKE AMEAPSPLNS RAESTRQFSK VEEERHRRVV
QVGTPINRSN VVILPKREMV GAVDYAAFLR SREQHTSQHG PVVEETPDFN MENQSQQPVG
GLLEATYPLS RGSGVVSENN AQWVEKPGLR DGLKVEPSHA LREGSELLEA SAFKASPLDR
LEHEEGALLL TETGWSNESR REVVAPAREE ADVTQNSERL FQQNSVPSHE QVMTFVQIDN
LLNQVLADRL LVQSQEPSNS GSNVDFPAIS LLHTDQTAFL GLPDTILDPH RPRVDEQGGL
FYSDLPPAAE PHMLDESENL GSRPGVVAAP EAESVQEVES VQEVEPVQEV EPVQEVESVQ
EVQPVQEVES VQEVESVQEV EPVQEVEPVQ EVESVQEVQP VQEVESVQEV EPVQEVEPVQ
EVESVQEVEP VQEVESVQEA ESVQEVEPVQ EAESVQEVES APVEEERGVE KTPGVVPTAE
ATHEAARGAV ENGSEGDASG GLQHGSDRPV HRAQRPDGYA SAFSAPVASI AANKSAAGMD
PAQLHKPGSG LSGPEAGGKQ QATSVVQGKE AMALAGGAVQ GGSTFTQASF DSASSVTVSR
VAQDILEQLD RDEQLSEPTS SHGLGTVQIP AHELADVQLD EQSGLIVDEI PVLETTRIQQ
RRSLANQARE QVAQKAAANP KEKEYGSSFS WANGFLFGRM KSHRIKLAAA ALEAPVRIEP
QIRRPKPLVS RLGQQSGLPK TMWLAFGWYA CGVILENLSS GAIRWYQGLT RLDGDVQVAF
LMDRARHLQR LGRQDEAQPL LEHVLNAPQA PCSAYLLLAD VFKAQGAPDR EEQVLFKALN
KGYDDCELFL RLGLLMQRSK RRESAIAYLR QCVAINPDLY EGLCALAQNL GHAGLPHEGL
AHLERAREIR PYDPHAFMLT AEILERLNEH EDAALFYQHV DELNQMLQVK PAHEQVVEDE
LS
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