| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_2201 |
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| Symbol | |
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| ID | 4482268 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 2806324 |
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| End bp | 2808087 |
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| Gene Length | 1764 bp |
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| Protein Length | 587 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639722946 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_866108 |
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| Protein GI | 117925491 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.854853 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.28263 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCAACC GAAAATACCA TCAAAGAGGC CAGCGTTTGC TTCGCTTAAC ACTGGCTATG
GGGTTGAGCC TAAGCGCTGT CTCTGCCCAG AGCGCAGCAA GCACCACCCC ACCGATCCAG
ACACCGTCGG AGCGTCTGGT GGCAGCTGCG GATCTGCCCA ATATGGTGGG AGAGGCCATC
CAAGCGGCCC CTGCACAACC CCCTGCAGAA AAGGGTGAGC AGGCCCAAAG CGCCGATGAA
AATGTGGTGA TACCGACCCC GCCTGCAAAT CAACAACCAC CAGGAGCGAT TGCTGAGTTT
GCGGTCTCTT CGTGGTGTGC AGGGGCGGGC TCTGTTATTG CACCATCGCC TGAGCAGCCG
CACATGACGC TGGGGCAGTT GATTGGGCTT CTACAGCGGC ACAACGCCAC GTTGCAGACC
AAGCAATTGG CCCAGCAAAG TGCCGAGGCT GCCGTGCAGC GGGCCAAGGG GGTGTTTGAC
CCGCTGGTAA GCTTTTCTCT CAAGCGGAGT CACCAGGAAG AGCCCAATAA CATTGAAGAG
AAATTAACCC GCTATACCAG TATTTATAAG ACCGATAGCA CGGCGGTTTC CATGTCCATG
AGCAAGCTGT TTTCTTCGGG TTTGCAATTA GAGGCCGAGG TGAGTGAAAC CAAACTGATG
ACCAGCACCA TGAAGACGCT GGATGCCAAT GAGCCGGATA ACCATCGTGC CTCCTACAGT
CTGAGTGTCA CCCAACCTTT GTTACGGGAT GCCCGTAGTA GCGTGGTGGA GGCGCCTGTC
CGGGCGGCTG AGTTGGGGCA TAAGGCGGCT GAGCATGAGC GTTTGGATAC CCAGTCCATG
GTCACTGCCG AGGCGGTGAT CGCCTATCAC GATCTGGTGT TGGCCCAGCA TAAGGTGGCG
GCCATGCAAG AGAAGATCGC CATGGCCAAC CGGTTACTCG GTATGGCAGA AGATCTCTAC
AAAAAGGGGC GTTTGCCCCA ATCGGATGTG TGGGAAGTGG AAAACTCTTT ATCCCGTTTT
GAAACGGCGT TGGCCGAGGC CCAGCAGGGG CAGCGGGAGC AGAGCAACCG TTTGCGCACC
ATGATTATGC AATCGCAAGG TGAGGATTTG GGGGTTTTGC AGGTTGCGGA TGTGTTGCCC
AAAAAGATAA GCAACCTGCC AACGCTAACC GAGAGTGTTG AGCAAGCCTA CGCCAAACGT
CAAGATCTAA AGGCTAAGCG CATGCTGCTT AAACAGCAGG ATGAACAGTT GGGTTACAGT
GAAAACCAGA TGCTACCGCG CCTTGATCTG GTGGCCAGCT ATGGACGTAG TGGTTTAGCC
TACGATGGCT TGGATGCCTT TGAAGGGATG AAGGATTTAA GTCCAAGTTG GAGCCTAGGT
GTGCAGGCTT CCGTGACGTT AAACGGCAAT AAGCAGGCGA AGGCGGACGT ACAGAGTGCG
CGGGCCAAAC GGGAAGAAGC CGCACTGGCC GTCAAATCAT TAGAAGTGAC CATCACGAAT
GATATTGATA CCAGCCTGAA CGCGTTAAAG AGTGCCTGCA AACGCTGGAA ATATTGGGAT
AAGGTCGCCA ACCGTGAAGA GCAACGGGTG GTCATGGAAA AAGATCGGGT CAAAGCGGGT
CGCAGCGATG TACGCCAGCT CTTGCTCAGT GAAGAGCGGG CGATCGACGC CCGTCAGGTG
CTCAAAGAGC AGCAGGTTGC CTTTGCGAAA GCACAAGCCT TATTAGCCAC CGCGCAGGGG
ACCTTATTGG AGCAGTTTCA TTGA
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| Protein sequence | MINRKYHQRG QRLLRLTLAM GLSLSAVSAQ SAASTTPPIQ TPSERLVAAA DLPNMVGEAI
QAAPAQPPAE KGEQAQSADE NVVIPTPPAN QQPPGAIAEF AVSSWCAGAG SVIAPSPEQP
HMTLGQLIGL LQRHNATLQT KQLAQQSAEA AVQRAKGVFD PLVSFSLKRS HQEEPNNIEE
KLTRYTSIYK TDSTAVSMSM SKLFSSGLQL EAEVSETKLM TSTMKTLDAN EPDNHRASYS
LSVTQPLLRD ARSSVVEAPV RAAELGHKAA EHERLDTQSM VTAEAVIAYH DLVLAQHKVA
AMQEKIAMAN RLLGMAEDLY KKGRLPQSDV WEVENSLSRF ETALAEAQQG QREQSNRLRT
MIMQSQGEDL GVLQVADVLP KKISNLPTLT ESVEQAYAKR QDLKAKRMLL KQQDEQLGYS
ENQMLPRLDL VASYGRSGLA YDGLDAFEGM KDLSPSWSLG VQASVTLNGN KQAKADVQSA
RAKREEAALA VKSLEVTITN DIDTSLNALK SACKRWKYWD KVANREEQRV VMEKDRVKAG
RSDVRQLLLS EERAIDARQV LKEQQVAFAK AQALLATAQG TLLEQFH
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