| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_2177 |
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| Symbol | |
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| ID | 4483010 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 2684929 |
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| End bp | 2686764 |
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| Gene Length | 1836 bp |
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| Protein Length | 611 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639722921 |
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| Product | GAF domain-containing protein |
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| Protein accession | YP_866084 |
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| Protein GI | 117925467 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.266529 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGGCG ACGTTCAGGA ATGGACCACC GATCTGTGGC AACAACTGCA CACGACCCAC
GATGACGCCC AGTTTATCGA GGTGTGGATG CATCTGCTGG CGCGTCAGGC TGGCTCGGTG
ACTCAGGGTG TATTGGTGAT GGGCGAAGCC AACAGTGGCC CCTTTTTACC CGTCGCTTTT
TGGCCTCCGC AAAAGCCATG TGGTGCGGCC TTGGCCGCCG CCTGTGAACA GGCTATGGAG
ATGCGTCTGC CCCTAACCCG ACAGAGCAGC GCCGGGGGCG TGCTGGCGGT GCCCATTATC
CAAGATATGG ATCTGTTGGG GGTAGTAGGG TTGGGTTTTC AACAGCCTGC GGTACCCGCG
CAGGCTAAAT TATGGATTCA ATGGGGGCTG GGCTGGCTTT GGAGCCGGGG TAATCATGGC
GCGGAGGCGG GCAGCGCCAA CAGCGCCCTT AATGAACGTC TCATGCGCGC ACTCAATTTG
ATGATGAGCG CCTTAGAGGC AGAAAAGGCG CAGGATGCCT ACCAGATTAC GCTCACCGAA
GCGGCGGTTG AGCTGGGGTG TGATCGGGTC TCTTTAGGCT TTGGCAAGGG GGGCATGGTG
CGCTTTGCGG CACTTTCCCA TTCGGCGGAT TTTTCTAAAA AGATTGATCT GGTGCAGGAT
CTCGAAGCGG CCATGAACGA GGCGGCCGAC CAAGGTCTGC CGGTGCTCTA CCGCCGTGAA
AAACCCCAGC AGTTGGAACA GGATGAAAGC ACAACGGTGG TGCGCGAACA CCGCGCCCTG
GCGCAGCAAC ACGGGAATCG GGTGCTCTTT TCCGTGCCCT TTTTTGTTTC CGAGGAGCAG
TATGGGGTCT TTTTGTATGA GTGGTCGGAT GATGAAGTGG ATGCTACCGC TCAACAACTC
GCCATGGGAT TGCCACCGAT TTTGGGCCGG GTGTTGCTGG AAAAACGGGA GAGCCAACGA
CCTCTGCTTC AGCGTGTGGG CAAAAGCATA GGCCATTGGT TAGAAAAACT GCTGGGTGCC
GGGTATGTGG GGTTAAAACT GTGGTTTATC GCCCTGCTGG CCACGGGTCT GTTTTTTACC
CTGGCAACCG GTATGTTCCG GGTGGCGGCG GATGCCAAGT TAGAAGGGGC GGTGCAGCGG
GTGGTGGCGG CTCCCTTTGA CGGTTTTGTC GCCACAGCCT CGGTGCGGGC CGGGCAGTAT
GTGCAGGAAG GGGAGCTGTT GGCGACCCTG GATGATCGGG AAATTGCCCT GGAGCTCTCC
CGCTGGGAGA ACCAGCAGAT TCAATTTTTA AAGCAGGCGC AAGATGCCCA GGCGCAACAT
AACTCGGCTC AGGTGCGCAT TGCTTTGTCC CAGGCCAAAC AAGCCGCCGC GCAGCGGGAT
CTGGCACAAG AAAAATTGCG ACGGGCGCAG CTTACCGCCC CTTTTGCCGG ATTGGTGGTG
CGGGGGGATC TGAGCCAACG TTTGGGCAGC GCGGTGCAAA AGGGTGAAAT GCTGTTTGAA
TTGGCCCCCT TGGCCAGCTA CCGGGTCGTA TTGCAGGTGG AGGAGGCTGA TATTGCCCAG
GTAGAGAGTG GGCAACAGGG CGAGCTGATT TTAACCGCGC TACCCAACGA CCGTTTTCCT
ATCAAAATCA ATCTTATTAC CCCCGTAGCG GTGGCCGACC AAGGCACCAA CCGCTTTCGG
GTCGAAGCTG AATTGTTGGA TGGGGTGGCG TTGGTGCGCC CCGGCATGGA GGGGGTAGGT
AAAATTGAGA TTGAAGAGCG TCGTCTGTTG TGGATCTGGA CACGGCGCTT TGTGGATTGG
TTGCGCCTAA AGGCGTGGAC CTGGTTGGGT GTTTAG
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| Protein sequence | MSGDVQEWTT DLWQQLHTTH DDAQFIEVWM HLLARQAGSV TQGVLVMGEA NSGPFLPVAF
WPPQKPCGAA LAAACEQAME MRLPLTRQSS AGGVLAVPII QDMDLLGVVG LGFQQPAVPA
QAKLWIQWGL GWLWSRGNHG AEAGSANSAL NERLMRALNL MMSALEAEKA QDAYQITLTE
AAVELGCDRV SLGFGKGGMV RFAALSHSAD FSKKIDLVQD LEAAMNEAAD QGLPVLYRRE
KPQQLEQDES TTVVREHRAL AQQHGNRVLF SVPFFVSEEQ YGVFLYEWSD DEVDATAQQL
AMGLPPILGR VLLEKRESQR PLLQRVGKSI GHWLEKLLGA GYVGLKLWFI ALLATGLFFT
LATGMFRVAA DAKLEGAVQR VVAAPFDGFV ATASVRAGQY VQEGELLATL DDREIALELS
RWENQQIQFL KQAQDAQAQH NSAQVRIALS QAKQAAAQRD LAQEKLRRAQ LTAPFAGLVV
RGDLSQRLGS AVQKGEMLFE LAPLASYRVV LQVEEADIAQ VESGQQGELI LTALPNDRFP
IKINLITPVA VADQGTNRFR VEAELLDGVA LVRPGMEGVG KIEIEERRLL WIWTRRFVDW
LRLKAWTWLG V
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