| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_2152 |
|---|
| Symbol | |
|---|
| ID | 4481417 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | - |
|---|
| Start bp | 2642936 |
|---|
| End bp | 2644381 |
|---|
| Gene Length | 1446 bp |
|---|
| Protein Length | 481 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 639722896 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_866059 |
|---|
| Protein GI | 117925442 |
|---|
| COG category | [R] General function prediction only
[S] Function unknown |
|---|
| COG ID | [COG1355] Predicted dioxygenase
[COG2078] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00296] uncharacterized protein, PH0010 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.404851 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCTCCA TCAAAGTAAC CCTAAGCAGT GCCAAACCCC ACAGCCAGGT AAGCCCTAAC
CCGGAACGCT TAGCAGCCCG CGGTTATCAC CGCATTCGCC CTGCGGCGGT GGCGGGGATG
TTTTACCCAG CCCAGGCCGA CGCATTGCGT CAGTTGGTGC GTTCTCTCTT GCAACAGGCC
CCGAAACGGC ATGACCAAGG GGAACCCCGC GCCTTTGTGG CCCCCCATGC AGGCTACCGC
TACTCGGGCT TAACGGCGGC TTATGCTTAT AACACCCTAC AGGCAGCCCC CAAAGAGCGA
CCCCGGCGGG TGTTTTTGCT GGGGCCCAGT CATCGGGTGG CCCTGCATGG GGCCTCTTTG
GGTAACTACG ATGCCTTTGA GACCCCCTTG GGTCTGGTTG AGGTGGATCT GCCCTTGGTT
GAGCGTATGG CGGCCCAGGA GAGCGATCTG GTATTGGACA ATGCGCCTCA CGCTCAAGAG
CATTCACTGG AGGTACACCT GCCCTTTTTA CAAGAGAGTT TGGCTCATTT TCGTTTGGTG
CCCATGGTGT TTGGTCGCAT TGAACCAAGC CGAGTTGCAG AAATTTTAGC CAAATATAGG
GAGGCTGATG ATCTTATTGT GGGTTCGTCG GATCTTTCGC ACTTTTACGA CTACGACACC
GCCGTGGGCT TGGATCATAC CTGCAATGAG GCAGTGCTTA ACATGGATTT ACAGGCCATG
GCCCAATGTG AGGCGTGCGG CAATATTGCC ATTCGCGCTT TGATGCAGAC GGCCCAACAC
CAAGGGTGGC TACCGGAGTT GGCGGACTAT CGCAATTCTG GCGACACAGC GGGGGATAAA
AAGCGGGTGG TGGGTTATGC CAGTTATCTG TTTATGCAGC CAGAACAGGC AAAAGGATCG
CTGGCCCCAT TGCCGCCATT GGTGCGGCGT CATTTGGCCC AAGTGCTTAG CGGAGAAGCA
GGGCTAAGCG CAGAACAGTT GGTGCAAACT CAGCCTCAGC TTGGGCAACC GGGAGCCTGT
TTTATTACCC TGACCAAACA GGGGCAGTTG CGGGGTTGTA TTGGTTCGCT ACAGGCGCAC
CGCAGTTTGG CAGAAGATCT GTTGGCCAAT GGGGTGGCGG CGGCATTAAA AGATCCCCGT
TTTCCTGCGG TCAACCGAGA AGAGTTGGAC CAACTGCGGG TGGAGGTGTC GCTGCTTACC
CCAGCGGTAA AGTTGGAGTA TCGCGATAGT GCCGACCTGT TGGAAAAGCT TAAACCAGGG
GTGCATGGGG TGATTCTCTC CATGGGCACG CGGCGCAGCA CCTTTTTACC CCAGGTGTGG
GAGCAGTTGC CAACCCCAGA GCTGTTTTTA AATCATCTTT GCAAAAAGGC CGGTTTGCAG
GGCGATTGCT GGCAACAAGG GCCAGAAATC TCCGTCTATA CGGTGGAAAA GGTCAAAGAG
GGCTGA
|
|---|
| Protein sequence | MASIKVTLSS AKPHSQVSPN PERLAARGYH RIRPAAVAGM FYPAQADALR QLVRSLLQQA
PKRHDQGEPR AFVAPHAGYR YSGLTAAYAY NTLQAAPKER PRRVFLLGPS HRVALHGASL
GNYDAFETPL GLVEVDLPLV ERMAAQESDL VLDNAPHAQE HSLEVHLPFL QESLAHFRLV
PMVFGRIEPS RVAEILAKYR EADDLIVGSS DLSHFYDYDT AVGLDHTCNE AVLNMDLQAM
AQCEACGNIA IRALMQTAQH QGWLPELADY RNSGDTAGDK KRVVGYASYL FMQPEQAKGS
LAPLPPLVRR HLAQVLSGEA GLSAEQLVQT QPQLGQPGAC FITLTKQGQL RGCIGSLQAH
RSLAEDLLAN GVAAALKDPR FPAVNREELD QLRVEVSLLT PAVKLEYRDS ADLLEKLKPG
VHGVILSMGT RRSTFLPQVW EQLPTPELFL NHLCKKAGLQ GDCWQQGPEI SVYTVEKVKE
G
|
|---|
| |