| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_2046 |
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| Symbol | |
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| ID | 4481780 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 2528045 |
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| End bp | 2529346 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639722789 |
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| Product | serine peptidase |
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| Protein accession | YP_865953 |
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| Protein GI | 117925336 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.075058 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAATC TATCCCATAT GGCATCCCGA ATCCTCGGGA CGCCGCTTAT GGTCGATCGC
GCCCGCTTGG AGACTATTCT CTCGGTCATT GGTCCCCGCG TCGGCTTGGA GCCAACGGCC
ATGCCCAGCG GCTTTGAGCC CAAAGACCAT AGCTCTGATT TGATGGTCAC GCCTAATGGA
ATCGCCATCG TGCCCATCCA CGGCACCCTG GTGAAACGGG TGGGGGCCGT CGAGGCTGCT
TCGGGGCTCA TGTCCTACGC ATCCATTGAA GAAAAACTGC TGGATGCCGC CACCGACCCA
GCCGTGCGAG CAATCCTAAT GGATATCGAC TCCCCTGGTG GTGAGGTGGG CGGGGTGTTT
GATCTGGCTG CCATGATCCA TGAGGCGGGG CAGGGCAAGC CCATCTGGGC CCTAGCCGAT
GATGCCTTTT CCGCTGCCTA TCTCATCGCC TCCCAGGCTC ATCGCATTAT TGTGCCCCAA
ACTGCGGGGG TGGGCTCCAT CGGCGTCATA GCTGCTCATG TGGATGAGTC GGAGAAGGAT
GCCAAAGAGG GGCGTAGCTA CACCACGGTG TTTGCCGGAG CCCGGAAAAA TGACTTTTCC
ACCCACGCCC CTCTCTCTCT AGAGGCCCGG ACTAACCTGC AACTGGAGGT AGATCGGCTC
TACGGTATGT TCGTCGCCGC CGTGGCAGCA GGTCGCAAGA TGCATGAATC GGCGGTGCGT
GCCACCGAGG CAGGCCTGTT CTTTGGCGAC AAGGCAATCC GGGTTGGTCT GGCTGACCAG
GTTGGCACCA TCCGGGATGC CCTGGCTGGC CTGTCAATAA CTATTGATGC GTCCAAAAAG
ACCCATTCTC ACCGAGCGGC ACTGCCGCGG GAACCTGTGT ATATGGAGGA AACCATGCCC
ATGGAAGAAA ATCCGGCGGC TGAAACATCT GTTGTCACGT CACGACAATC CCAACCTGAC
CTTCACGCCA AATCCGACAT AATGTCGGAT TTGACTGACC AATCTGCGGT ATCCAACGTT
GTGGACCTAG ACAAGGTCCG TGCCGAGCAT GGCCAACAGA TGCGCAATGA GGCTCAGGCT
ATTGTTGATC TCTGTGCCCT GGCGGGCATG CCTCACTTGG CAGGCGGCTA TATCGCCGAA
GGTACTGCTG CTGAGGCGGT ACGCAAAGAG CTATTGGCCA AGCGGGCCGA TGCTGAGGAG
ATCCACTCCG AGGTGATGCC TGGAGATGGC ACCCGTATGC AGCCCAGACA GAGTCTTGAA
ACCAACCCGG TGGTGGCCTC CTGCCGCAAA CTCGCCGGTT AA
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| Protein sequence | MTNLSHMASR ILGTPLMVDR ARLETILSVI GPRVGLEPTA MPSGFEPKDH SSDLMVTPNG
IAIVPIHGTL VKRVGAVEAA SGLMSYASIE EKLLDAATDP AVRAILMDID SPGGEVGGVF
DLAAMIHEAG QGKPIWALAD DAFSAAYLIA SQAHRIIVPQ TAGVGSIGVI AAHVDESEKD
AKEGRSYTTV FAGARKNDFS THAPLSLEAR TNLQLEVDRL YGMFVAAVAA GRKMHESAVR
ATEAGLFFGD KAIRVGLADQ VGTIRDALAG LSITIDASKK THSHRAALPR EPVYMEETMP
MEENPAAETS VVTSRQSQPD LHAKSDIMSD LTDQSAVSNV VDLDKVRAEH GQQMRNEAQA
IVDLCALAGM PHLAGGYIAE GTAAEAVRKE LLAKRADAEE IHSEVMPGDG TRMQPRQSLE
TNPVVASCRK LAG
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