Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_2013 |
Symbol | |
ID | 4483334 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 2491955 |
End bp | 2493781 |
Gene Length | 1827 bp |
Protein Length | 608 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 639722756 |
Product | zinc finger SWIM domain-containing protein |
Protein accession | YP_865920 |
Protein GI | 117925303 |
COG category | [S] Function unknown |
COG ID | [COG4715] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.450022 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATGCGT TTTCAACCTC AATCTTTCCC TGGAAGACTC TGATGGCACG GAAAAAGAGC AACCCCGATG CACTGGAAAA GGCCCTGACC ACCGCCACCA TAATGGAGCT GGCAGGCAAC CGCTACTACT GGCGTGGGAA TGAATACTTC CAGGACGGGG CCGTCACCAG TCTGAAAGAG AGCGACGGGA TCATCACCGG CAAGGTGCAG GGCACGCGGG CCTACAAGGT CCAGCTCTGG GTTGAGGAAG ACGAGCTTGA ACACAACTGC TCCTGCCCCT TGGGGGAGGA TTGCGAGTTC TGCAAACACT GCGTAGCCGT CGGACTTGCT TGGCTGGCGA GGGATCAGAA GGCCCCATTG GCGGAGGCCG GCAAAAAGGC CAGCGACAGC ATCGGCGAGA AGGACGTCCG GGATTTCCTC ATGGGCAAGA GCAAAGAGGC CCTGGTGGAG ATGCTCTTGG AGCAGTGCGA GGAGGACGAC CGGCTCAACC GCCGCCTGTT GGCCATGACC GCCAAGACCA GCCGGGACAA GTTGGACCTC TCGGTCTGGA AGGACGCCAT CGAAGAGGCG GCATGGTCGG ATGATTTCGT CGACTGGCGG CACATGCCCG ACTACTCCAG CGGCATCGGC GAGGTGGTCG AATCCATCGA GGAGCTGCTC CACGAAGGCC ATGCCGAGGC GGTGATCGAA ATCACGGAAC ACGGCCTCAG CGTCATGGAG CGCGCCGTGG AACAGGTGGA TGACTCCGGC GGCGACATGG GCATGCTCAT GAAGCAGTTG CAGGATCTCC ACCTCAAAGC TTGCCGCAAG GCCAAACCTG AACCCGCCTC GTTGGCGGAG CGGCTGTTTG CCTGGGAGTT GGGCAACGAC TGGGGCACCT TTTCCCATGC CGTCGAAACC TACGCCGACG TGCTGGGGGA TGCCGGCCTG ACCCGGTATC GAAAGTTGAC CGAAGAGGCC TGGGCCAAGG TGAAGGCGTT GGAATCTAGG GAGCAGGATG CCAGACGCTA CGACAGCAAA CGGTACCGCA TCACCTCCAT GATGGAGTCC CTGGCCAAGG CATCCGGCAA CCTGGAAGAG CTGGTGGCCA TCAAGTCGAA GAACCTGTCC CGCCAGTTTC ACTTTTTGGA GATTGCCGAG ATCTACCAGA AGGATGGCCA GGACGACACC GCCCTGGAGT GGGCCGAACG GGGCTGGAAG GCCTTTCCGG AAAAAGGTGG TGATGCCAGG CTTCGGGAGT TCATCGCCCA CGCCTACCAT CGGCGCGACC GGCATGACGA TGCCATGGCC ATGACCTGGA CCGCTTTCAC CGAGCGCACA TCCTTTGATA TGGTCAAGAC TCTGGCTGAG CACGCCAAAC TGGCCAAGGC GTGGCCGGAA TGGCGGGAGA AGGCGCTGGC TCATATCCGG GAGCAGATCG CCGCATCAAA ACAGCAGCAG ACCGGTCGGC GGCGGTGGGA CTACGACTCC CTGAACGACC ACTCCATCCT GGTGCAGGTG TTCCTGTGGG AGAAGGAGAT GGACGCCGCC TGGAATGAGG CCCGGGAGGG CGGATGCTCG GGGCCGCTTT GGCTGGAACT GGCCGGCCTG CGAGAGAAGA CGGACCCTTA CAACTCGGTG CAGATCTACC GAGAGCACAT CCGGATCCTC CTGAAACACG CCGACAAGCG CTACTATGAG GGGGCGGTGG AGTACCTTGC CAAGATCAAG AAGCTCCTCG GGGCCATAGG CAAGGCAGAG GAGTTTCCGG CCATCGTGGC CGATGTGCGC AACGAGCACC GGCGCAAGCG CAACCTCATG GCGCTGCTGG ACCGGAAGAA GTGGTGA
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Protein sequence | MDAFSTSIFP WKTLMARKKS NPDALEKALT TATIMELAGN RYYWRGNEYF QDGAVTSLKE SDGIITGKVQ GTRAYKVQLW VEEDELEHNC SCPLGEDCEF CKHCVAVGLA WLARDQKAPL AEAGKKASDS IGEKDVRDFL MGKSKEALVE MLLEQCEEDD RLNRRLLAMT AKTSRDKLDL SVWKDAIEEA AWSDDFVDWR HMPDYSSGIG EVVESIEELL HEGHAEAVIE ITEHGLSVME RAVEQVDDSG GDMGMLMKQL QDLHLKACRK AKPEPASLAE RLFAWELGND WGTFSHAVET YADVLGDAGL TRYRKLTEEA WAKVKALESR EQDARRYDSK RYRITSMMES LAKASGNLEE LVAIKSKNLS RQFHFLEIAE IYQKDGQDDT ALEWAERGWK AFPEKGGDAR LREFIAHAYH RRDRHDDAMA MTWTAFTERT SFDMVKTLAE HAKLAKAWPE WREKALAHIR EQIAASKQQQ TGRRRWDYDS LNDHSILVQV FLWEKEMDAA WNEAREGGCS GPLWLELAGL REKTDPYNSV QIYREHIRIL LKHADKRYYE GAVEYLAKIK KLLGAIGKAE EFPAIVADVR NEHRRKRNLM ALLDRKKW
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