| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_2007 |
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| Symbol | |
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| ID | 4483328 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 2487495 |
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| End bp | 2488331 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639722750 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_865914 |
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| Protein GI | 117925297 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00437999 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.132428 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCGCA AGATGCTCGT GCCCTTGGCC GTTTTGGCCG CCCTTAGTTT ATCTGTTATC
AACCAGGCGG CCGCCGCCAG CCGTGCAGAG GTGCAAAATA TGGTGGTGGT GTTGGCCAAA
CATACCCGCG TACCCCCTTC ATTGGCGCTG GCGGTGGCCA AAGTGGAGTC GGATTTTCAG
GACGATTTGC AGGGTAAAGC CGGTGAACGT GGTGTGATGC AAATTCTGCC AAAAACGGCT
ATGAACCTTT GGGGGGTCCG TGCCGATAGC CTGGATAATC CTCGCACCAA TATTCAGTTG
GGCCTAGATT TTTTGGATCG TCTGCTGGAA CGTTATGAGG GTCGTTTTGA TTTGGCGCTC
TCCCACTACA ATGGCGGTTC GCGGGTGGGC AAAATGCCCA ATGCACGGGT GATCCCTTCT
ACGCGCGACT ATGTCGATAA AGTGTTGACC TGGGAAAAGC ACTTCCGTGG CCAAGAGGAG
AGCCTTTTAG CTGCGAACCA TGCGCCCACA GCTGAGGAGC GGCCAGCTAT TTCGGTCATT
GGTACCCAAC GCTTTCCAGA ATCGATTAAA CCCGAAACTG GGCCGGAACC GAGTGCTCAA
GCATCGTTGC AGCAGACGCG TGAGCTGGCC CAAGAGTTGT GGGGCGATAA TCCAGATCAA
ACAGGGTTCA CGCGTCGCTT AGAGGGGCAC TACGCTGGTA CGGAAGAGGC TTTTAATCAC
AAGGGATACC TCTCGCCATC CGCACGTTTT CGTGGCAAAA TGAACACGTT ACGCCAGAAA
TTTCGCCACT ATCTTAATAA CCATGACCGT CGCTGGCAGG GGTATTCTGA TATGTAG
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| Protein sequence | MTRKMLVPLA VLAALSLSVI NQAAAASRAE VQNMVVVLAK HTRVPPSLAL AVAKVESDFQ
DDLQGKAGER GVMQILPKTA MNLWGVRADS LDNPRTNIQL GLDFLDRLLE RYEGRFDLAL
SHYNGGSRVG KMPNARVIPS TRDYVDKVLT WEKHFRGQEE SLLAANHAPT AEERPAISVI
GTQRFPESIK PETGPEPSAQ ASLQQTRELA QELWGDNPDQ TGFTRRLEGH YAGTEEAFNH
KGYLSPSARF RGKMNTLRQK FRHYLNNHDR RWQGYSDM
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