| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_2003 |
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| Symbol | |
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| ID | 4483324 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 2480318 |
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| End bp | 2482813 |
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| Gene Length | 2496 bp |
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| Protein Length | 831 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639722746 |
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| Product | Sel1 domain-containing protein |
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| Protein accession | YP_865910 |
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| Protein GI | 117925293 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0515794 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0202924 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATCC ATTGGGCAAA AGGGTTGGGT TTTGGCATAT TGCTTGTGTT GGCGGGTGGG
CTATTTGCGT GGAATTTTTT CTTATCCCAT CCACCAAGGG CCAAAACAGC TGCCCAACGA
GCTGTGGCTG AGATTTTTGC GCCGATTTAC CGTGAACCGA GGTGGGATCA CGTACGGACC
ATCGGATTGC AGCCAAAATT TACGGGTTGT GAGACGGTGG ACGAACACCA TTATAAGACG
GCATTGGTGC CGATGGCTGG TCCTAAACTC TCGCTTCGCG AGCGGGGCGG GGATTTGCAG
GCCCTTTTTG CGGATGAAGC CATGATTCGC CGTCTGTTTA ATCATGAAGT AACATCCGAA
AAGTCGGCGC ATACCCTAAT AAAAATAGAG CATGTACAAG CGCTTTTGCT TGGACAATGT
GTGGAGCAGA AGCTTTTTTT AAAATTGGTC ACAACGGCCC ATGGAGATAT TGTGGCAACC
GTTGAGATAG CCCTGGGAGA TGCAGCCGAA GCCGAGCAGC GTGCCGCCGA GCAGGCCAGA
GTTAAAGAGG AGGAGGAGCG CCTAACCCGT ATACGGGTCA AAGCGCAAGA GGCCGAGCAG
CGTGCCGCCG AGCAGGCCAG AGTTAAAGAG GAGGAAGAGC GCCTAACCCG TATACGGGTC
AAAGCGCAAG AGGCCGAGCA GCGTGCCGAG CAGGCCAGAG TTAAAGAGGA GGAGGAGCGC
CTAGCCCGTA TACGGGTCAA AGCGCAAGAG GCCGAGCAGC GTGCCGCCGA GCAGGCCAGA
GTTAAAGAGG AGGAAGAGCG CCTAATCCGT ATTCGGGTCA AAGCGCAAGA GGCCGAGCAG
CGTGCCGAGC AGGCGCGTGA ACATGCGAAG GATGCCGCTA AGATAGCCCT GGGGGATGCC
GCCAAGCTGG CCAATCCCTC TGTTCAATTC AATCTTGGCG TTATGTATGA CAAAGGACAG
GGCGTCACGA AAGACGCCAA AGAGGCGGTG AAGTGGTTTA GGAAATCTGC TGAACAGGGG
TATGCCCAAG CTCAACACAA TCTTGGCGTT ATGTATGACA AAGGAGAGGG CGTCACGAAA
GACGCCAAAG AGGCGGTGAA GTGGTTTAGG AAATCTGCTG AACAGGGGCA TGCCCAAGCT
CAACACAATC TTGGCGTTAT GTATGACAAA GGACAGGGCG TCACGAAAGA CGCCAAAGAG
GCGGTGAAGT GGTTTAGGAA ATCTGCTGAA CAGGGGCATG CCCAAGCTCA ACACAATCTT
GGCGTTATGT ATAACAATGG AGAGGGCGTC ACGAAAGACG CCAAAGAGGC GGTGAAGTGG
TATCGGAAAG CGGCTGAACA GGGGCATGCC CGAGCTCAAA ACAATCTTGG CGTTATGTAT
AACAATGGAG AGGGCGTCAC GAAAGACGCC AAAGAGGCGG TGAAGTGGTA TCGGAAAGCG
GCTGAACAGG GGCAAGCTGA AGCTCAAAAC GATCTTGGCG TTATGTATGA CAAAGGAGAG
GGCGTCACGA AAGACGCCAA AGAGGCGGTG AAGTGGTATC GGAAAGCGGC TGAACAGGGG
CATGCCCGAG CTCAAAACAA TCTTGGCGTT ATGTATAACA ATGGAGAGGG CGTCACGAAA
GACGCCAAAG AGGCGGTGAA GTGGTATCGG AAAGCGGCTG AACAGGGGCA AGCTGAAGCT
CAACACAATC TTGGCTTTAT GTATGACAAA GGAGAGGGCG TCACGAAAGA CGCCAAAGAG
GCGGTGAAGT GGTATCGGAA AGCGGCTGAA CAGGGGCAAG CTAAAGCTCA ACACAATCTT
GGCGTTATGT ATAACAATGG AGAGGGCGTC ACGAAAGACG CCAAAGAGGC GGTGAAGTGG
TTTAGGAAAT CTGCTGAACA GGGGGAAGCT AAAGCTCAAC ACAATCTTGG CGTTATGTAT
AACAATGGAG AGGGCGTCAC GAAAGACGCC AAAGAGGCGG TGAAGTGGTT TAGGAAATCT
GCTGAACAGG GGGAAGCTGA AGCTCAAAAC AATCTTGGCT TTATGTATGA CAATGGAGAG
GGCGTCACGA AAGACGCCAA AGAGGCGGTG AAGTGGCTTA GGAAAGCGGC TGAACAGGGG
CACGCTAACG CTCAAGCCTT TCTTGGACAA AGCTATGATG TAGGATATGG AGTCACGAAA
GACGCCAAAG AGGCGGTGAA GTGGTATAGG AAATCTGCTG AACAGGGGCA AGCTGAAGCT
CAAAACAATC TTGGCGTTAT GTATGACAAA GGACAGGGCG TCACGAAAGA CGCCAAAGAG
GCGGTGAAGT GGTATCGGAA AGCTGCTGAA CAGGGAGATG CTCGAGCTCA ATTCAATCTT
GGAGATAAGT ATGACAAAGG AGAGGGCGTC ACGAAAGACG CCAAAGAGGC GGTGAAGTGG
TATCGGAAAG CGGCTGAACA GGGCTTAACG GAAGCAAGTA CCAGGCTGAA GCGGCTACGC
TTTAACGTTG TTGGACACGA AAATGAGGGA AAATGA
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| Protein sequence | MKIHWAKGLG FGILLVLAGG LFAWNFFLSH PPRAKTAAQR AVAEIFAPIY REPRWDHVRT
IGLQPKFTGC ETVDEHHYKT ALVPMAGPKL SLRERGGDLQ ALFADEAMIR RLFNHEVTSE
KSAHTLIKIE HVQALLLGQC VEQKLFLKLV TTAHGDIVAT VEIALGDAAE AEQRAAEQAR
VKEEEERLTR IRVKAQEAEQ RAAEQARVKE EEERLTRIRV KAQEAEQRAE QARVKEEEER
LARIRVKAQE AEQRAAEQAR VKEEEERLIR IRVKAQEAEQ RAEQAREHAK DAAKIALGDA
AKLANPSVQF NLGVMYDKGQ GVTKDAKEAV KWFRKSAEQG YAQAQHNLGV MYDKGEGVTK
DAKEAVKWFR KSAEQGHAQA QHNLGVMYDK GQGVTKDAKE AVKWFRKSAE QGHAQAQHNL
GVMYNNGEGV TKDAKEAVKW YRKAAEQGHA RAQNNLGVMY NNGEGVTKDA KEAVKWYRKA
AEQGQAEAQN DLGVMYDKGE GVTKDAKEAV KWYRKAAEQG HARAQNNLGV MYNNGEGVTK
DAKEAVKWYR KAAEQGQAEA QHNLGFMYDK GEGVTKDAKE AVKWYRKAAE QGQAKAQHNL
GVMYNNGEGV TKDAKEAVKW FRKSAEQGEA KAQHNLGVMY NNGEGVTKDA KEAVKWFRKS
AEQGEAEAQN NLGFMYDNGE GVTKDAKEAV KWLRKAAEQG HANAQAFLGQ SYDVGYGVTK
DAKEAVKWYR KSAEQGQAEA QNNLGVMYDK GQGVTKDAKE AVKWYRKAAE QGDARAQFNL
GDKYDKGEGV TKDAKEAVKW YRKAAEQGLT EASTRLKRLR FNVVGHENEG K
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