Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_1946 |
Symbol | |
ID | 4480461 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | + |
Start bp | 2420239 |
End bp | 2421012 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 639722696 |
Product | OmpA/MotB domain-containing protein |
Protein accession | YP_865860 |
Protein GI | 117925243 |
COG category | [N] Cell motility |
COG ID | [COG1360] Flagellar motor protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0980886 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTAAGA AATGTCCACC ATGTAAAAAG GGCGCACCAG GTTGGATGGT GACCTTCGGG GATCTCATGT CCCTGCTGCT GACCTTCTTC GTGCTATTGC TCTCGTTTGC GCAGCTGGAC ATCGTGAAGT TTGAGAAAGT CTCAGGCTCC ATGAAGGATG CCTTTGGTGT GCAACGTATC GAACAGATCA ATGCGATCCC CACGGGCAAC ACCATTATCG CGCCAGAGTT TGCCAGCGAA ATGGTGCTAG TGCAGCTGCG TGAAAAGGTT GAAAATGTGT TGGGTCCCAT GGTGGATAAC GGCGAAGCAG AGATGTATAC CGACCAAGAT GGCTTTGTCA TGCAGATTGA TTCCGATACC ACCTTTGTGC CCGGTACCCT GCAATTGTCA GATACGTTTC AGGCTAAATT GACGGAGATC TGCAACATTT TAACAACCCA CCCTGACACC AAGAACAATA AAATTCGCAT TATCGCCCAC ACCGACACAA CCCCCCCGCC CGGCGGCATG CTCCCCACCA ATTGGGCGCT GTCTGCTGCA CAGGCCGCTG CGGTAGTGGG TTATATGAGC ACTCAAGGAG GCGTGGACCC TGTGCGCTTA GAGGTGCGTG CTAAAGGTGA ATTTGCGCCC AAAGAGTCCA ATGACACCGC CGATGGGCGC TCTAAAAATC GCCGTATCGA GATTTTAATC TCGCGGGAGA CCGTACCCAG TGTCATGGAA GAATATGTGG ACGACAAAAC CTTGCAAGGA TCTGAAAAAC CCGCCTCCCC CTGA
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Protein sequence | MGKKCPPCKK GAPGWMVTFG DLMSLLLTFF VLLLSFAQLD IVKFEKVSGS MKDAFGVQRI EQINAIPTGN TIIAPEFASE MVLVQLREKV ENVLGPMVDN GEAEMYTDQD GFVMQIDSDT TFVPGTLQLS DTFQAKLTEI CNILTTHPDT KNNKIRIIAH TDTTPPPGGM LPTNWALSAA QAAAVVGYMS TQGGVDPVRL EVRAKGEFAP KESNDTADGR SKNRRIEILI SRETVPSVME EYVDDKTLQG SEKPASP
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