Gene Mmc1_1946 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_1946 
Symbol 
ID4480461 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp2420239 
End bp2421012 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content52% 
IMG OID639722696 
ProductOmpA/MotB domain-containing protein 
Protein accessionYP_865860 
Protein GI117925243 
COG category[N] Cell motility 
COG ID[COG1360] Flagellar motor protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0980886 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTAAGA AATGTCCACC ATGTAAAAAG GGCGCACCAG GTTGGATGGT GACCTTCGGG 
GATCTCATGT CCCTGCTGCT GACCTTCTTC GTGCTATTGC TCTCGTTTGC GCAGCTGGAC
ATCGTGAAGT TTGAGAAAGT CTCAGGCTCC ATGAAGGATG CCTTTGGTGT GCAACGTATC
GAACAGATCA ATGCGATCCC CACGGGCAAC ACCATTATCG CGCCAGAGTT TGCCAGCGAA
ATGGTGCTAG TGCAGCTGCG TGAAAAGGTT GAAAATGTGT TGGGTCCCAT GGTGGATAAC
GGCGAAGCAG AGATGTATAC CGACCAAGAT GGCTTTGTCA TGCAGATTGA TTCCGATACC
ACCTTTGTGC CCGGTACCCT GCAATTGTCA GATACGTTTC AGGCTAAATT GACGGAGATC
TGCAACATTT TAACAACCCA CCCTGACACC AAGAACAATA AAATTCGCAT TATCGCCCAC
ACCGACACAA CCCCCCCGCC CGGCGGCATG CTCCCCACCA ATTGGGCGCT GTCTGCTGCA
CAGGCCGCTG CGGTAGTGGG TTATATGAGC ACTCAAGGAG GCGTGGACCC TGTGCGCTTA
GAGGTGCGTG CTAAAGGTGA ATTTGCGCCC AAAGAGTCCA ATGACACCGC CGATGGGCGC
TCTAAAAATC GCCGTATCGA GATTTTAATC TCGCGGGAGA CCGTACCCAG TGTCATGGAA
GAATATGTGG ACGACAAAAC CTTGCAAGGA TCTGAAAAAC CCGCCTCCCC CTGA
 
Protein sequence
MGKKCPPCKK GAPGWMVTFG DLMSLLLTFF VLLLSFAQLD IVKFEKVSGS MKDAFGVQRI 
EQINAIPTGN TIIAPEFASE MVLVQLREKV ENVLGPMVDN GEAEMYTDQD GFVMQIDSDT
TFVPGTLQLS DTFQAKLTEI CNILTTHPDT KNNKIRIIAH TDTTPPPGGM LPTNWALSAA
QAAAVVGYMS TQGGVDPVRL EVRAKGEFAP KESNDTADGR SKNRRIEILI SRETVPSVME
EYVDDKTLQG SEKPASP